Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08238 ATGTATCCTTCTTCCTCTTCGGCTTCCTCGTCGTCCTCGACCCAGCAACAGCAAAGCTCCATCACCCACACGGGCTTAACCCGGTACGGTTCCGCCCCAGGGTCTCTGCTAACGAGCACCGTCGATGCAGTGATTGGTGGATCGCGGTTTCTAGCAGGACAAGGACAAGGACATGGTCATGGCCACGGGCATGGGCATGGGCATTACTACTCAGGAGACTCTTCAGAGCCCAGCTGCAAAGAGCAGAGATCTTCTTCTCCTTATGAGCCTTTTCCTGGATCCGCCTTGCTCCGTCAGAAAAGCTCCCCCGCGGGCTTCCTCTCCCATCTCGCCAACACTTCTACTCACAATGCGGGCTTCACAATCACGAGGGGCAGCTCGCGATTGAAATCTGAATTGAGCTTCACGGGACAAGGACAAGGTCAAGAATGTTTTTCTAGGATATCTGAAGGTGTGGTTGATCCAACTTCTGACCACACTACATCGACACCTACTTATGCTGGCACTGCCTTTGGAATCCAACCGTCCTGCTCTTGGGACAATTCTAATTCCATCGTGTTTTCTGCTCCTCAATCTAAGCGTTCTAAACCGAACGATCCTGACATTCTACATTGCCTCACTGCCCTTGAATCTCAGTTTAGTCTGCCACAAACAACTCTCGAAATGGCAACCGTCGACAAGCTATATATTCCTGAAGATTCCGTCCCTTGTAAAATCCGTGCTAAGCGAGGCTGTGCTACTCATCCTCGTAGCATTGCTGAAAGGGTGTGCTGTGTGCATATGGGCCAGGTCAGGCCAGCCACCTCAGTCCTGACCCTGTTGGCCTAG 828 0.5205 MYPSSSSASSSSSTQQQQSSITHTGLTRYGSAPGSLLTSTVDAVIGGSRFLAGQGQGHGHGHGHGHGHYYSGDSSEPSCKEQRSSSPYEPFPGSALLRQKSSPAGFLSHLANTSTHNAGFTITRGSSRLKSELSFTGQGQGQECFSRISEGVVDPTSDHTTSTPTYAGTAFGIQPSCSWDNSNSIVFSAPQSKRSKPNDPDILHCLTALESQFSLPQTTLEMATVDKLYIPEDSVPCKIRAKRGCATHPRSIAERVCCVHMGQVRPATSVLTLLA. 276
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08238 275 MobiDBLite consensus disorder prediction 1 33 - -
Seca8g08238 275 MobiDBLite consensus disorder prediction 53 97 - -
Seca8g08238 275 MobiDBLite consensus disorder prediction 75 89 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08238 Seca-Chr8 180075036 180076331 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08238 25 255 Basic Helix-Loop-Helix Transcription Factor Gene Family AT1G05805 36.426 2.56e-33 123
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08238 - - vra:106771988 240.35
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08238 8 180075036 180076331 Seca8g08238 8 180075036 180076331 ECH
Seca8g04907 8 136011474 136014855 Seca8g08238 8 180075036 180076331 ECH