Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08224 ATGATGGAGGTTGTGGGTTTGGTGTTAGCCATGTTGGCCATTGGGTTATGCTTGGCAATGATGGAACGTAGAACAACTCATAATAAGCTTCCACCAGGACCAACACGTTGGCCAGTGGTTGGCAACATTTTCCAACTGGGTTGGTCACCCCATGAGTCATTTGCAAAACTCGCTCGCAAACATGGTCCTATCATGACCCTTTGGTTAGGTTCCATGTGCACAGTGGTTATCTCCTCCAGTGAAGTGGCTCGTGAAATGTTCAAACACAACGACGTCGTTCTCGCTGGTAGGAAGATTTATGAGGCCATGAAAGGGGACCATGGCACTGAAGGCTCTCTCATCACTTCTCAATACAACGCACACTGGCGCATGCTTAGGCGTTTGTGCACCACTGAGTTCTTTGTCACCACTCGTTTAGATGCCATGCGAGGTGTGCGAGCGAAGTGCATACACCGCATGGTACACTTGATTGAAGAATCTAGCACTAGTGGCGGTGTTGATGTTGGGAGGTTCTTTTTCTTGATGGCTTTTAACCTTATTGGGAACCTCATTTTTTCAAAGGATTTGTTGGATCCTGAGATGGAGAAAGGGGCTAGATTTTATTACCATGCTGTTAAGGTTATGGAGTATGCTGGGAAGCCAAATGTGGCAGATTTTTTCCCAGTTTTGAAGTGGCTTGACCCTCAACGTATAAGGAGAAAGACACAATTCCATGTTGAGAGAGCCTTTGAGATAGCAGGATGGTTCATCAAACAAAGGATGGAAAATGGTTGCAATGGAAAGGACACCAAAGATTTCTTGGATGTCTTGTTGGAGTTTCGTGGGGATGGTGTCAGTGGGCCCTATACCTTTTCTCCAAGAACTATTAATGTCGTTGTCTTTGAAATGTTCACAGCAGGGACAGACACGACAACAAGCACAATGGAATGGGCCATGGCAGAGCTTCTGCATAACCCGAGAACGCTAAAGAAGGTGCAGATGGAGCTAAGGAGCAAAATAGGGGCAGATAGGAATATTGAAGAGAAGGACATAGATAATCTTCCTTACCTCAAAGCAGTGATCAAGGAAACACTGAGGCTTCATCCACCTCTTCCTTTTTTGGTTCCACACATGGCCTTGGACTCTTGCAAGATGCTAGACTACTGTATTCCCAAAGAATCACAGATTTTAGTGAATGTTTGGGCAATTGGGAGGGACCCCAAAGTGTGGGATGCTCCCTTGTTGTTCTGGCCAGAAAGGTTTTTGGAGCCAAACATGGTGGATTACAAGGGACACCATTTTGACTTTATCCCTTTTGGTTCGGGTCGTAGAATGTGCCCAGCTATGCCACTAGCTTCTCGCGTGCTTCCCTTGGCACTGGGATCCCTTTTGCACTCGTTTGATTGGGTTTTGCCAGATGGCCTTAAACCAGAGGAGATGGACATGACAGAGGGAATGGGAATAACGCTTAGAAAAGCTGTTCCTTTGAAAGTCATCCCAGTTCCTTACAGAGGAAATCCTGTTGCAGATGAGTAA 1515 0.4607 MMEVVGLVLAMLAIGLCLAMMERRTTHNKLPPGPTRWPVVGNIFQLGWSPHESFAKLARKHGPIMTLWLGSMCTVVISSSEVAREMFKHNDVVLAGRKIYEAMKGDHGTEGSLITSQYNAHWRMLRRLCTTEFFVTTRLDAMRGVRAKCIHRMVHLIEESSTSGGVDVGRFFFLMAFNLIGNLIFSKDLLDPEMEKGARFYYHAVKVMEYAGKPNVADFFPVLKWLDPQRIRRKTQFHVERAFEIAGWFIKQRMENGCNGKDTKDFLDVLLEFRGDGVSGPYTFSPRTINVVVFEMFTAGTDTTTSTMEWAMAELLHNPRTLKKVQMELRSKIGADRNIEEKDIDNLPYLKAVIKETLRLHPPLPFLVPHMALDSCKMLDYCIPKESQILVNVWAIGRDPKVWDAPLLFWPERFLEPNMVDYKGHHFDFIPFGSGRRMCPAMPLASRVLPLALGSLLHSFDWVLPDGLKPEEMDMTEGMGITLRKAVPLKVIPVPYRGNPVADE. 505
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08224 504 PRINTS E-class P450 group I signature 429 439 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS E-class P450 group I signature 175 193 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS E-class P450 group I signature 351 369 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS E-class P450 group I signature 308 334 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS E-class P450 group I signature 58 77 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS E-class P450 group I signature 392 416 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS E-class P450 group I signature 288 305 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS E-class P450 group I signature 439 462 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 SUPERFAMILY Cytochrome P450 31 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS P450 superfamily signature 299 316 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS P450 superfamily signature 430 439 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 PRINTS P450 superfamily signature 352 363 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 Gene3D Cytochrome P450 23 495 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 ProSitePatterns Cytochrome P450 cysteine heme-iron ligand signature. 432 441 IPR017972 GO:0005506|GO:0016705
Seca8g08224 504 PANTHER CYTOCHROME P450, FAMILY 76, SUBFAMILY C, POLYPEPTIDE 5-RELATED 7 495 - -
Seca8g08224 504 Pfam Cytochrome P450 31 482 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g08224 504 CDD CYP76-like 58 493 - -
Seca8g08224 504 FunFam Cytochrome P450 76C4 22 492 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08224 Seca-Chr8 179806136 179807791 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08224 3 499 Cytochrome P450 AT3G52970 62.644 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08224 - - gmx:100778988 849.351