Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08199 ATGACAAGGAACACCGCCATGTTGTCCGGAAAAGAGGCGTGGGTCCCACTAGCTGGTCGTCACACCACCAACCCATTCCCATCCACCGCTCAATTTTCATGGGGCAAAGGTTCATCCCCTACTCTCACTCCCAACCCAATTTCTCTCTATAATCAGATGATCAGTGAAAGAGCTCAACCTGTCCAATTATTCTCATCCTCATCAAGTACCACCAAATCCAGACCAGGCGAGATTGGAGAGAAAAATAAATCAAGGGAAACGGTGAGGAAACAAGGTCAATTTCTCCTTGAATCATCCCCTACTGAGAACCATGTCGGTGTGGGTGTGAATGTCGCTGCAACATCAATGGTAAGGCCAATTCCAAGAGAGTTTAATCCCAATCCTGATGATAACAACAACATCAACGTCAGCATCAACAAGACGATTCCTGCTACAAATCACCACTCTATAGTGTTGTCGTCACATAATTACCAGTATTACCCGATTGCTTCATCTTTGCAAAACATGAATGGGCTTGGGCAGAATAGAAACAATCAGCGTGGAAGTGCAAGTGCAAGTTCTAATTGGGCTATTGTTACTTCTGCTGCTGATGATGAGATGGATGGAAATTATGATGGTCGAATCCACAGCCTTCCACGTGAGAATAATGGGCTATACACATGCCCAAAGTGCTACCAACAGTGCTCTACCTCACAAAGCTTTGCAGCTCATGTGAATAGTATTCACTACACGAATGAAACAAGAGCTCAGAAAAGGAAGAGACTTTTGGCCAGAATCCAACACAGAAATCTCCGCCTTCAAAAGGTAAATGGTGGGATCACTTTTGTTCCTGTGTCTAATTCTGAGGCTACACCTGCACCTGTACTTGCTCCTGCTCAAGGTGGGGGAGGACATGAACATGCTCATGCTGTTGTAAGGGTCAAAGTTGAAGGTGGTCAACAGGCTGCTCCTCCTATAGGAAAGAAAGCTCATGGCAATGGTATAATTGGAGGGGTCAACATCAAATTGGAGCATGTTGATGCATAA 1026 0.4503 MTRNTAMLSGKEAWVPLAGRHTTNPFPSTAQFSWGKGSSPTLTPNPISLYNQMISERAQPVQLFSSSSSTTKSRPGEIGEKNKSRETVRKQGQFLLESSPTENHVGVGVNVAATSMVRPIPREFNPNPDDNNNINVSINKTIPATNHHSIVLSSHNYQYYPIASSLQNMNGLGQNRNNQRGSASASSNWAIVTSAADDEMDGNYDGRIHSLPRENNGLYTCPKCYQQCSTSQSFAAHVNSIHYTNETRAQKRKRLLARIQHRNLRLQKVNGGITFVPVSNSEATPAPVLAPAQGGGGHEHAHAVVRVKVEGGQQAAPPIGKKAHGNGIIGGVNIKLEHVDA. 342
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08199 341 ProSitePatterns Zinc finger C2H2 type domain signature. 221 242 IPR013087 -
Seca8g08199 341 MobiDBLite consensus disorder prediction 62 86 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08199 Seca-Chr8 179449809 179451129 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08199 194 297 C2H2 Transcription Factor Family AT5G22990 43.269 5.23e-16 75.9
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF C2H2 Seca8g08199 None None None
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08199 - - aprc:113873287 121.709