Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08197 GTTTATGGATTCTCGTGGATAGTGCTGGCTGGGCTTATACTCCTTTTCAAGGTATTCACATTTAGCCAGAAGATATCGGTCAATTTCCAGCTTCTTCTGCGCTTTATACAAGGACTCTCCCTCTTAATGGCACTGGCTGGTATAGCTGTAGCAGTTATATTGACAGATCTATCTTTACCTGATATATTTGCTTCTATGTTAGCATTCATTCCTACTGGATGGGGAATTCTATCGATCGCTGCTGCTTGGAAGCCTGTGATGAAAAGGCTGGGACTATGGAAATCCATTCGATCGATCGCCCGCCTGTATGATGCTGGCATGGGAATGCTCATCTTTGTACCCATTGCATTCTTTTCGTGGTTTCCATTTGTATCAACATTCCAAACTCGCCTCATGTTTAATCAGGCTTTTAGTCGAGGGTTAGAAATTTCTCTAATCCTTGCTGGAAACAATCCCAATACTGGGATATAG 471 0.4268 VYGFSWIVLAGLILLFKVFTFSQKISVNFQLLLRFIQGLSLLMALAGIAVAVILTDLSLPDIFASMLAFIPTGWGILSIAAAWKPVMKRLGLWKSIRSIARLYDAGMGMLIFVPIAFFSWFPFVSTFQTRLMFNQAFSRGLEISLILAGNNPNTGI. 157
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08197 156 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 1 149 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08197 Seca-Chr8 179420639 179422201 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08197 1 156 Cell Wall Biosynthesis AT3G07160 82.051 6.27e-83 264
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08197 K11000 - gmx:100787540 291.582