Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08196 ATGCTGAGTAACATGAACTTGTGTTGTATTGGAGGCTATAGAGTTAGTGGAAGATGTGTTCTGAGTGAGATTGATGGAAACGTACTCAATGAGGATGAGTGGAAAAACTTTCTTGCCCGTATTGGTCGTGATGAAAATGCACTTGACTCTGAGCTTCATGACCCTAGTGATATTCTTGAACTGCGTTTTTGGGCTTCTTATCGGGCACAAACATTGGCCAGAACAGTTCGGGGGATGATGTATTATAGGAAAGCTCTTATGCTTCAAACCTATTTGGAGAGGACAACTGCTGGAGATTTGGAGGCAGCAATTGGTTTTGATGAAGTGACTGATACACGCGGCTTTGATTTATCCCCGGAAGCACGCGCTCAGGCAGATCTCAAGTTCACTTATGTTGTCACATGCCAAATTTATGGTAAGCAGAAAGAGGAGCAAAAACCTGAGGCTGCTGATATTGCTTTACTTATGCAGAGAAATGAAGCTCTTCGCGTCGCTTTTATTGATGTTGTTGAAATTTTAAGAGATGGAAAAGTGAACACGGAATACTACTCTAAACTTGTGAAAGCTGATATTAATGGGAAAGACAAGGAAATATACTCGGTGAAATTACCTGGAAATCCCAAACTTGGTGAAGGGAAACCTGAGAATCAAAATCATGCGATTATATTTACCCGTGGAAATGCAATCCAGACAATTGACATGAATCAGGATAACTATTTTGAAGAGGCTTTGAAGATGAGGAATCTTCTTGAAGAATTTCATTCTGATCATGGACTTCGTCCTCCTACCATACTTGGTGTTAGAGAACATGTCTTTACCGGAAGTGTCTCATCTCTGGCCTCCTTTATGTCCAATCAAGAAACTAGTTTCGTGACTTTGGGCCAGCGGGTTTTAGCAAATCCTTTGAAGGTCCGTATGCATTATGGTCATCCTGATGTTTTTGATAGAGTGTTCCACATAACCCGTGGTGGTATCAGCAAGGCTTCTCGTGTTATCAATATTAGTGAAGATATCTACTCAGGATTCAATTCAACCTTGCGCCAAGGAAATGTTACACATCATGAATATATTCAGGTTGGTAAGGGAAGAGATGTTGGGCTCAATCAGATTGCACTATTTGAAGGGAAGGTTTCAGGTGGTAATGGGGAACAAGTTCTCAGTCGCGATGTATACAGACTTGGGCAACTTTTTGATTTCTTCCGGATGATGTCTTTTTACTTTACAACAGTTGGATATTACTTTTGCACCATGTTAACAGTGCTGACTGTTTATGCCTTTCTTTATGGAAAAACGTATTTGGCACTATCTGGTGTTGGTGAAACCATTGAAGAAAGGGCTAAGATAACCAAGAACACTGCCCTTAGTGCTGCTTTGAATACCCAGTTCCTCTTTCAAATAGGTGTCTTCACTGCTGTGCCAATGATCTTGGGCTTCATTCTTGAACAAGGTTTCTTGAGGGCCATTGTCAGTTTTGTCACAATGCAGTTCCAGCTCTGCACTGTTTTTTTCACATTTTCCTTGGGTACAAGAACACATTATTTTGGTCGGACCATTCTTCATGGTGGTGCAAGGTATCAAGCAACTGGCCGTGGGTTTGTTGTCCGCCATATTAAATTTTCAGAGAATTACAGACTCTACTCTCGTAGTCATTTTGTTAAAGGGTTGGAAGTTGTGCTTTTGTTGATAGTATATCTTGCTTATGGCTACAATGAAGGGGCAGTCTCATATATTCTTCTGAGTATAAGCAGTTGGTTTATGGCTTTATCCTGGTTGTTTGCTCCATACATATTCAACCCATCCGGATTTGAGTGGCAAAAGGTAGTGCAAGACTTCCGAGATTGGACGAATTGGCTACTCTACAGAGGTGGAATTGGTGCTCATATCAGGACTTTGGGTTCAAGGATAGTAGAGACCATCCTGAGTCTAAGATTTTTCATTTTTCAATATGGTATTGTGTACAGGCTTGACGTGAAAGGAACAAATACTTCATTGACGGTATTACATGCTTAA 2010 0.4085 MLSNMNLCCIGGYRVSGRCVLSEIDGNVLNEDEWKNFLARIGRDENALDSELHDPSDILELRFWASYRAQTLARTVRGMMYYRKALMLQTYLERTTAGDLEAAIGFDEVTDTRGFDLSPEARAQADLKFTYVVTCQIYGKQKEEQKPEAADIALLMQRNEALRVAFIDVVEILRDGKVNTEYYSKLVKADINGKDKEIYSVKLPGNPKLGEGKPENQNHAIIFTRGNAIQTIDMNQDNYFEEALKMRNLLEEFHSDHGLRPPTILGVREHVFTGSVSSLASFMSNQETSFVTLGQRVLANPLKVRMHYGHPDVFDRVFHITRGGISKASRVINISEDIYSGFNSTLRQGNVTHHEYIQVGKGRDVGLNQIALFEGKVSGGNGEQVLSRDVYRLGQLFDFFRMMSFYFTTVGYYFCTMLTVLTVYAFLYGKTYLALSGVGETIEERAKITKNTALSAALNTQFLFQIGVFTAVPMILGFILEQGFLRAIVSFVTMQFQLCTVFFTFSLGTRTHYFGRTILHGGARYQATGRGFVVRHIKFSENYRLYSRSHFVKGLEVVLLLIVYLAYGYNEGAVSYILLSISSWFMALSWLFAPYIFNPSGFEWQKVVQDFRDWTNWLLYRGGIGAHIRTLGSRIVETILSLRFFIFQYGIVYRLDVKGTNTSLTVLHA. 670
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08196 669 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 31 666 - -
Seca8g08196 669 Pfam 1,3-beta-glucan synthase component 54 627 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08196 Seca-Chr8 179392459 179408138 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08196 32 666 Cell Wall Biosynthesis AT3G07160 82.488 0.0 1126
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08196 K11000 - gmx:100787540 1206.05