Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08195 ATGTCTCGAGTGGAGGAACTTTGGGAGCGGCTAGTCCGTGCTGCATTGAGGAGGGAAAGGACTGGTGATGATGCATATGGACGACCTGTTGGTGGAATTGCTGGAAATGTACCATCTGCCCTTGCTAAGAATAGGGACATTGATGAAATTTTAAGAGTTGCAGATGAAATTCAAGATGATGATCCCAATGTCTCTAGAATATTATGTGAGCATGCATATTCATTGTCTCAAAATTTGGACCCTAACAGTGAAGGCCGAGGTGTTTTACAATTCAAGACTGGTTTGATGTCTGTCATTAAGCAAAAGCTAGCCAAAAGAGAAGTTGGAACCATTGATAGGAGTCAGGATATTGCTCGATTACAAGAGTTCTACAAGAGCTACAGAGAGAAGCATAATGTGGATAAATTACGTGAGGAAGAAATGAAGTTGAGGGAATCTGGTGCTTTCAGCCGGGATCTTGGCGAGTTGGAGCGCAAGACCTTGAAGAGGAAAAGAGTTTTTGCTACCTTAAAGGTTTTAGGAACAGTACTTGAGCAGCTGAGCGAAGAAATTCCTGATGAGCTCAAGCGGCTCATGGAATCAGATTCTGCATCGACAGAGGATTTGATTGCCTACAACATCATTCCTTTAGATGCTTCTTCTTCAACAAATGCCATTGTTTCTTTCCCTGAGGTGCAAGCAGCAGTTTCTGCTTTGAAGTATTTTAGTGGCTTGCCAGAATTGCCCAGGGGCTTTTTCATTTCTTCTACAAGGAATGCTAACATGCTTGACTTTCTGCATTATACTTTTGGATTTCAGAAAGATAATGTAGCTAATCAGCACGAACACATAATTCACCTGCTTGCAAATGAGCAATCTATGATTGGAATTCCAGATGGAAATGAACCTGAACTGGATGAAGCAGCTGTGCAGAGAATATTCCTCAAATCCCTTGAAAATTACATTAACTGGTGTAATTATTTATGCATTCAGCCTGTTTGGAGCAGTTTGGAGTCTGTTAGTAAACAGAGGAAATTGCTTTATGTTTCTTTATACTTCCTAATATGGGGTGAAGCCTCAAATATCAGATTTCTGCCTGAATGCTTGTGCTACATATTTCATCATATGGCAAGGGAGATGGATGAGATCTTAAGGCAGCAGATTGCACAGACAGCTAATAGTTGCTCTTCTGAGAATGGTGTCTCATTTCTTGATCATGTTATCCTTCCTCTCTATGACGTTATTGCTGCAGAAGCTGCAAACAATGATAATGGCAAGGCACCTCATTCTTCCTGGAGAAATTATGATGATTTTAATGAATATTTTTGGTCACTACATTGCTTTGAGCTTAGTTGGCCATGGCGCAAAAGTTCTAAATTTTTTCAAAAGCCACTACCTAGATCAAAGAAAATGCTTATATCTGGCGGGAGTCAGCATCAGGGAAAAACATCTTTTGTGGAGCATCGAACTTTTTTTCATCTTTATCATAGCTTCCACCGATTGTGGATATTTCTTTTCATGATGTTCCAGGGTCTAACCATTATTGCTTTCAATAATGGAAATCTTAATAGCAAGACCTTGCGAGAGGTTCTGAGTGTTGGACCTACATTTGTTGTGATGAAATTTTTTGAGAGTGTCCTGGACATTTTCATGATGTATGGTGCATATTCAACAACGAGGCGCTTAGCTGTCTCCCGCATTTTTCTTCGATTTCTTTGGTTTAGCCTTTCTTCAGTTTTCATAACATTCCTTTATGTAAAAGCACTCCAGGAAGAGAGTAAAAGAAATGCAAATTCAGTTATTTTCAGATTGTATGTGATTGTCATAGGGATTTACGCTGGTGTCCAATTTTTCATCAGTTTCCTCATGCGGATTCCTGCATGTCATCGTGTAACAAATCAATGTGATCGTTGGCCTTTTATTCGCTTTGTGAAGTGGATGCGCCAGGAACGGCATTATGTTGGAAGGGGAATGTATGAAAGGAGTTCAGATTTCATAAAGTATATGCTGTTTTGGCTTGTCATTTTGAGTGGAAAATTCTCGTTTGCTTACTTTCTTCAGATCAAGCCACTGGTGGACCCAACAAGGGATATTATAAAAGAGAATAACATAATATACTCTTGGCATGATTTTGTCTCTAAAAATAATCATAATGCTTTGACTGTTGTTAGTGTATGGGCTCCAGTATTTGCTATATATCTTCTAGATATATATGTGTTTTACACACTTGTATCGGCAGTCTGGGGATTCTTGCTTGGGGCAAGAGATCGTCTGGGAGAGATTAGGTCACTGGAAGCGCTGCATAAACTTTTTGAGCAATTTCCTGGAGCATTTATGGACACTCTTCATGTTCCTCTACCCAGAAGGAGCTCCCACCAGTCTTCTCTTCAGGAGATGGAGAGGAACAAGGTTGATGCTGCCCGGTTCTCACCCTTTTGGAATGAGATCATAAGAAATCTAAGGGAGGAAGATTATATAACTAACTTTGAGATGGAATTACTTTTAATGCCAAGAAATTCTGGGGATCTTCCTCTGGTTCAGTGGCCACTTTTTCTACTTGCAAGCAAGATATTTTTGGCTAGGGATATTGCTGTTGAGAGTAAAGATTCTCAAGATGAGCTTTGGGATAGGATTTCCCGAGATGACTATATGATGTATGCTGTTCAGGAGTGTTACTATGCTATTAAACTCATTTTGACAGAAGTATTAGATGATGAGGGACGGATGTGGATCGAAAGGATATATGATGATATTAATGCTAGTATCACAAAGAGGAATATTCATGTGGACCTTCAACTAAATAAGTTGGCTCTTGTGATATCAAGAGTAACTGCATTGATGGGGATTCTGAAAGAGACTGAAACACCTGAACTGAAAAGGGGTGCAGTGAGAGCTTTTCAGGATCTCTATGAAATTGTACGACTTGATGTCCTTGCTATAAATATGAGGGATCATTATCACACATGGAATTTACTGACCAAAGCTAAGGAGGCAGGGCATTTGTTTGAAAAGTTGAAATGGCCCAATGCAAACTTAAGAGTTCAAGTCAAAAGATTGTATTCTCTGCTGACTATCAAAGGGTCTGCCTCAAGCATTCCTAAAAATCTTGAGGCCAGGCGAAGGCTGGAGTTTTTCACAAATTCACTTTTTATGAAAATGCCTCATGCAAAGCCAGTTCGAGAGATGTTATCCTTTAGTGTTTTCACCCCTTATTATTCTGAGACTGTGCTTTATAGCATGGCTGAGCTCCTAAAGAAAAATGAAGATGGCATTTCAATTTTGTTCTACCTTCAGAAGATATATCCAGGTAATTTTTACTTCATTTTGCTTCAATCAGAATATTATATTATAACTGGATGGCCTACTTCATTGAATGGCTCCATCGCAACTTGTTGA 3375 0.3944 MSRVEELWERLVRAALRRERTGDDAYGRPVGGIAGNVPSALAKNRDIDEILRVADEIQDDDPNVSRILCEHAYSLSQNLDPNSEGRGVLQFKTGLMSVIKQKLAKREVGTIDRSQDIARLQEFYKSYREKHNVDKLREEEMKLRESGAFSRDLGELERKTLKRKRVFATLKVLGTVLEQLSEEIPDELKRLMESDSASTEDLIAYNIIPLDASSSTNAIVSFPEVQAAVSALKYFSGLPELPRGFFISSTRNANMLDFLHYTFGFQKDNVANQHEHIIHLLANEQSMIGIPDGNEPELDEAAVQRIFLKSLENYINWCNYLCIQPVWSSLESVSKQRKLLYVSLYFLIWGEASNIRFLPECLCYIFHHMAREMDEILRQQIAQTANSCSSENGVSFLDHVILPLYDVIAAEAANNDNGKAPHSSWRNYDDFNEYFWSLHCFELSWPWRKSSKFFQKPLPRSKKMLISGGSQHQGKTSFVEHRTFFHLYHSFHRLWIFLFMMFQGLTIIAFNNGNLNSKTLREVLSVGPTFVVMKFFESVLDIFMMYGAYSTTRRLAVSRIFLRFLWFSLSSVFITFLYVKALQEESKRNANSVIFRLYVIVIGIYAGVQFFISFLMRIPACHRVTNQCDRWPFIRFVKWMRQERHYVGRGMYERSSDFIKYMLFWLVILSGKFSFAYFLQIKPLVDPTRDIIKENNIIYSWHDFVSKNNHNALTVVSVWAPVFAIYLLDIYVFYTLVSAVWGFLLGARDRLGEIRSLEALHKLFEQFPGAFMDTLHVPLPRRSSHQSSLQEMERNKVDAARFSPFWNEIIRNLREEDYITNFEMELLLMPRNSGDLPLVQWPLFLLASKIFLARDIAVESKDSQDELWDRISRDDYMMYAVQECYYAIKLILTEVLDDEGRMWIERIYDDINASITKRNIHVDLQLNKLALVISRVTALMGILKETETPELKRGAVRAFQDLYEIVRLDVLAINMRDHYHTWNLLTKAKEAGHLFEKLKWPNANLRVQVKRLYSLLTIKGSASSIPKNLEARRRLEFFTNSLFMKMPHAKPVREMLSFSVFTPYYSETVLYSMAELLKKNEDGISILFYLQKIYPGNFYFILLQSEYYIITGWPTSLNGSIATC. 1125
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08195 1124 Pfam 1,3-beta-glucan synthase component 1025 1098 IPR003440 GO:0000148|GO:0003843|GO:0006075|GO:0016020
Seca8g08195 1124 SMART FKS1_dom1_2 336 448 IPR026899 -
Seca8g08195 1124 Pfam 1,3-beta-glucan synthase subunit FKS1, domain-1 338 445 IPR026899 -
Seca8g08195 1124 PANTHER LYST-INTERACTING PROTEIN LIP5 DOPAMINE RESPONSIVE PROTEIN DRG-1 149 1099 - -
Seca8g08195 1124 Gene3D - 34 193 IPR023175 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08195 Seca-Chr8 179339981 179383272 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08195 1 1095 Cell Wall Biosynthesis AT3G07160 72.620 0.0 1677
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08195 K11000 - gmx:100787540 1960.27
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08195 8 179339981 179383272 Seca8g08195 8 179339981 179383272 ECH