Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08187 ATGGCTATACCCAATAATCGTGTACTCTCACTCTCACTCTCAGGACTGAGTGCAAAGCCAGAGCCTTTGGTTACTTCTCTTCCTTTCTCAACCACCCATTTCCATTTGGGCTATTCAGTTAATAAGCTTCAGCTTCGGCCGTTCAACATTAGAAGAAAATTGTATGGGGTTCCCATGGTGCCAATAGCTATGGCAACTGGGGTGCAAGAAGTTCTTCCACCACCCCTTACTTCCACTTCAGCCCCACCTTCCTTGTTTGATGGAACGACAAGGTTGTATATCTCCTACCAATGCCCGTATGCCCAGCGTGTATGGATCACCCGTAACTGTAAGGGATTGCAGGACATGATGCAATTGGTTCCAATTGATCTAAAAGATAGGCCTTCCTGGTATAAGGAGAAAGTCTACCCACCCAACAAGGTTCCATCTTTAGAACACAATAATGAAGTGAGAGGAGAGAGTCTTGATCTGATGAAATATATTGACAGTCACTTTGAAGGGCCTTCCCTTTTCCCTAGTGGTCCTGATAGGGAGTTTGCTGAAGAGTTGCTTTCTTACACTGATACCTTTTACAAGACCGTTATTTCTTCATTTAAAGGAGATGTGACTGAAGCCGGCACTGCATTTGATTACCTTGAAACTGCTCTCTCCAAATATGATCATGGACCTTTCTTCCTTGGCCAGTTCAGTCTAGTGGATATAGCATATGTTCCTTTCATTGAAAGATTTCAACCATTTTTAAGGGATGTGAAAAATTATGATATTAAAGTGGGCAGGCCTAAACTGGCAGCGTGGATTGAGTTCTGGAATCTGGACATCCAGACTGTGATATAA 834 0.4317 MAIPNNRVLSLSLSGLSAKPEPLVTSLPFSTTHFHLGYSVNKLQLRPFNIRRKLYGVPMVPIAMATGVQEVLPPPLTSTSAPPSLFDGTTRLYISYQCPYAQRVWITRNCKGLQDMMQLVPIDLKDRPSWYKEKVYPPNKVPSLEHNNEVRGESLDLMKYIDSHFEGPSLFPSGPDREFAEELLSYTDTFYKTVISSFKGDVTEAGTAFDYLETALSKYDHGPFFLGQFSLVDIAYVPFIERFQPFLRDVKNYDIKVGRPKLAAWIEFWNLDIQTVI. 278
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08187 277 Pfam Glutathione S-transferase, C-terminal domain 202 267 - -
Seca8g08187 277 Gene3D - 167 274 - -
Seca8g08187 277 Gene3D Glutaredoxin 63 166 - -
Seca8g08187 277 SUPERFAMILY GST C-terminal domain-like 165 267 IPR036282 -
Seca8g08187 277 PANTHER GLUTATHIONE S-TRANSFERASE L1 67 270 IPR044629 GO:0004364
Seca8g08187 277 Pfam Glutathione S-transferase, N-terminal domain 92 168 IPR004045 -
Seca8g08187 277 SUPERFAMILY Thioredoxin-like 81 170 IPR036249 -
Seca8g08187 277 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 88 169 IPR004045 -
Seca8g08187 277 FunFam Glutathione S-transferase L2, chloroplastic 63 166 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08187 Seca-Chr8 179257962 179261007 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08187 75 270 Glutathione S-transferase Gene Family AT5G02780 68.342 1.88e-95 279
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08187 K00799 - aew:130775349 343.199