Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08152 ATGGCTGTCTCTGTGTCCTTGTTGAAACTAAAGTTTTGGTTGATTTTTGTTACGTGTTGTGTTATTGGTATAAGTTCAGGTCAGTTATCCACTACATTCTATGATAAAACGTGTCCAAAAGCAGTTACTACCATTCGGAAATCAGTGGAAGATGCTGTCTCCAAAGAGCGTCGCATGGGAGCATCCTTGCTTCGACTCCATTTCCATGACTGCTTTGTTCAAGGATGTGATGCATCAGTGTTGTTAGATGACACAGATACTTTCACTGGTGAGAAGACTTCTTTTCCCAATGCTAATTCCCTTAGGGGTTTTGATGTCATAGACAACATCAAATCTAAGATGGAGAACATGTGCCCTGGAGTTGTCTCTTGTGCTGACATCTTAGCCCTTGCTGCCAGAGACTCTGTTGCTGCTCTTGGTGGACAAAGGTGGGAAGTGCAATTAGGCAGAAGAGATTCAACCACAGCAAGTTTAGCTGATTCTAATACTGACTTACCTGCTCCCTTTTTGGATCTTAATGGCCTTATCTCTGCTTTTGAGAAGAAAAATTTCACAGCCAAAGAAATGGTTACTTTATCAGGTAACTATATAACTAAATACCCTTTTAATTTAATTTCTAGATATATAGGCCTAGTGAGGTGCAGTTTATTCAGAGCAAGGATATATAACGAGACGAACATAGATCCTTCATTTGCAGCATCAATGCAACAAAATTGTCCCTTTGAAGGTGGTGATAACAATTTTTCTCCTTTCGATTCGACCACCTCATTTGTTTTTGACAATGCTTACTACCAGAACTTGGTGAGAAAGAGGGGTCTGATACACTCAGACCAACAACTGTTTGTGAATGGATCAGGACCCACAGACTCACAAGTGACTACATATAGCAGAAACATGGGACGTTTCAAAAAAGACTTTGCAGATGCAATGTTCAAGATGAGCTTGCTTACACCACTCACTGGCTCTGATGGTCAAATCAGGAAAAACTGCAGGGTCGTCAATTAA 1005 0.406 MAVSVSLLKLKFWLIFVTCCVIGISSGQLSTTFYDKTCPKAVTTIRKSVEDAVSKERRMGASLLRLHFHDCFVQGCDASVLLDDTDTFTGEKTSFPNANSLRGFDVIDNIKSKMENMCPGVVSCADILALAARDSVAALGGQRWEVQLGRRDSTTASLADSNTDLPAPFLDLNGLISAFEKKNFTAKEMVTLSGNYITKYPFNLISRYIGLVRCSLFRARIYNETNIDPSFAASMQQNCPFEGGDNNFSPFDSTTSFVFDNAYYQNLVRKRGLIHSDQQLFVNGSGPTDSQVTTYSRNMGRFKKDFADAMFKMSLLTPLTGSDGQIRKNCRVVN. 335
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08152 334 Gene3D - 32 331 - -
Seca8g08152 334 PANTHER PEROXIDASE 72-RELATED 26 333 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Haem peroxidase superfamily signature 252 267 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Haem peroxidase superfamily signature 140 152 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Haem peroxidase superfamily signature 122 139 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 FunFam Peroxidase 166 313 - -
Seca8g08152 334 CDD secretory_peroxidase 28 333 IPR033905 GO:0004601|GO:0042744
Seca8g08152 334 Gene3D Peroxidase, domain 2 166 313 - -
Seca8g08152 334 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601
Seca8g08152 334 PRINTS Plant peroxidase signature 250 265 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Plant peroxidase signature 266 283 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Plant peroxidase signature 308 321 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Plant peroxidase signature 140 155 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Plant peroxidase signature 102 115 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Plant peroxidase signature 187 199 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 PRINTS Plant peroxidase signature 121 131 IPR000823 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 FunFam Peroxidase 32 170 - -
Seca8g08152 334 Pfam Peroxidase 46 297 IPR002016 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 SUPERFAMILY Heme-dependent peroxidases 28 334 IPR010255 GO:0004601|GO:0006979|GO:0020037
Seca8g08152 334 ProSiteProfiles Plant heme peroxidase family profile. 28 334 IPR002016 GO:0004601|GO:0006979|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08152 Seca-Chr8 178967961 178969386 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08152 28 334 Peroxidase AT5G05340 54.693 7.08e-117 339
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08152 K00430 - gmx:100802244 491.5