Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08141 ATGATAAAAACGTTTAGCCTTAACATGAGCACCTCTGGTGGTCAATCATGGACGACCATATCAAATTCCCCTGAAGACACTGTTAGAATCACAACTAGGAAAACCAAAGAGCCTGGCCAACCAAATGGGGTTATTCTCGGTGCAGTTTCAACCACTCGGTTGCCCTATCCTCAAACCAAGGTCTTTGATCTCCTTAGGGATGAACGTCACAGATCTCAGATGGATGCTCTTTCCAATGGAAACTCATTAAATGAAGTTGCTCACATTTCAAATGGTTCACATCCAGGAAACTGCATTTCCCTTCTTCGCATAAATGTAGCAAGTAACTCATCCCATAATGTAGAGCTAGTTCTACAAGAGAGTTAA 366 0.4208 MIKTFSLNMSTSGGQSWTTISNSPEDTVRITTRKTKEPGQPNGVILGAVSTTRLPYPQTKVFDLLRDERHRSQMDALSNGNSLNEVAHISNGSHPGNCISLLRINVASNSSHNVELVLQES. 122
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08141 121 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 121 IPR042160 -
Seca8g08141 121 MobiDBLite consensus disorder prediction 1 24 - -
Seca8g08141 121 SUPERFAMILY Bet v1-like 7 113 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08141 Seca-Chr8 178892284 178892839 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08141 1 121 Homeobox Transcription Factor Family AT5G46880 68.595 3.03e-53 176
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08141 - - aip:107639924 217.624