Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08132 ATGCTCCCACACAGAAACACAACCACTGCTGTAATGTTCTCTTCCTCCAGAGTTTTCTCTTCTTCTTTTTCATTCCCTGATCTTTCCACCCCAAAACACACCTTCAATGAATCCCAAATGGAAGCAAACATTGAAAATGCTGAATCCTTCATTACTAGATGGGACTTAACCTCATCTAAAAACATCAACAAGGTGAAGGTGATTTCCTTATTCCAACATAACCGAAAAGAAGCAGATGATTTTCTCAAATTTGTCAGGAACTTGCATAAAACCATGCATTTCTTAGCAAGCAAAGATGCTTCTTCTGAGAAGCTTGTGCTAGCTCAGAAACTAATGCAGATTGCCATGAAAAGGCTTGAACACGAGTTCTACCAGATACTGTCTGCTAATCATGATCACCTTGATCCTGAATCAGTCTCTGACCTATCTTCAAGAGGGTCAGGAACAAGCAATTCTGATACACAAGATGAGATTATATCAGAAGAAGAGTTGATAATAGCAGGGGAATATGTTGCTGACATGGAAAGTGTCTCAGCAATTGCTTTGTCAGATTTAAAGTCAATAGCTGACTGTATGATCAGCTCTGGCCATGGTAAAGAGTGTTGCATGATATACAAGTTAATAAGAAAGTCCAAAATTGATGAAGGACTTTACAATCTTGGAGTAGAACAGCTCAAGTCTTCCCAAATTCGGAAAATGAAATTGCAAACCTTTGAGCAGGTAACTAAGAAGTGGTTGAATGCAGTAAAGATTGCTGTGAGAAACCTTTTCTCTGGTGAAAGAATTCTTTGTAACCATGTATTTTCAGCATCCAATGCAATCATGGAATCATGTTTCTCAGAGATAACTAGAGAAGCAGCAGTCATTTTGTTCAGGCTTCCTGAGCTTGTCACTAAGAGCAAGCGTTCACCAGAGAAGATTTTCAGCCTCATGGAACTCTATGAAGCTATCTCAGATCTCTTGCCAGAGATTGAGTCTATATTCTGTTTCAAATCAACACAAGCAATCAAGGTGCAAGCTCATTCTTCATTGGTAAAGCTTGGTGAGTCTATTAAAGCTACTTTATCAGACTTTGTAGCAGCAATTCAGAAAAACTCATCAAAATCTCCAATTCTTGGAGGGGCAGTTCACCCACTGACTCGATCAACAATGAGCTTCATATCCTTATTAACATCACATGAAGCAACTCTTTCCACCATTCTTGTTGGTAACCCTTTACCAATGAATTCACCTTGGCCAGAATCTTACTTAGAAAATCCAAATTCTACTGATGGTTCTACATCAGTAGTGTCAGTTCACCTAGCATGGCTCATATTGGTCCTTTTGTGCAAGCTTGATGGCAAAGCTAAGCTCTACAAAGATGTGTCATTGGCATATCTATTCCTTGCCAACAATCTTAGCTTCATTGTTGAGAATGTTCGCATGACCAATTTAATATGTCTCCTTGGTGATCATTGGGTGGCTAGACATGTCAAGAGTGTGAAACTATATGCTTCAAGCTGTGAATCAGTGACTTGGACAAAAGTTCTCTCAGCTTTACCAGAGAAAGGTTCCAAAACAGTAGTGCCAGAATTTGCTATGGCCTGTTTCAGGAAATTTAAGACAGCTTTGGAAGATGCATATAGGAATCAGATGTCTTGGATTGTGGAGGATGGGAAATTAAGGGAAGACCTGAAGCTGTCGATAGCATGCAAACTAGTCCCAAAATATCAAGACTTCTATGACACATATTTGGTGAAGTTTAGAGGGGAAATTGAAAATAATTTGGAGTCATTAGCATGGTTCTCACCAAATGATCTCTCAAATTACTTGTCACATCTATTCCATGGTGCTTCCACTTTGGGTTCTACATAA 1854 0.3916 MLPHRNTTTAVMFSSSRVFSSSFSFPDLSTPKHTFNESQMEANIENAESFITRWDLTSSKNINKVKVISLFQHNRKEADDFLKFVRNLHKTMHFLASKDASSEKLVLAQKLMQIAMKRLEHEFYQILSANHDHLDPESVSDLSSRGSGTSNSDTQDEIISEEELIIAGEYVADMESVSAIALSDLKSIADCMISSGHGKECCMIYKLIRKSKIDEGLYNLGVEQLKSSQIRKMKLQTFEQVTKKWLNAVKIAVRNLFSGERILCNHVFSASNAIMESCFSEITREAAVILFRLPELVTKSKRSPEKIFSLMELYEAISDLLPEIESIFCFKSTQAIKVQAHSSLVKLGESIKATLSDFVAAIQKNSSKSPILGGAVHPLTRSTMSFISLLTSHEATLSTILVGNPLPMNSPWPESYLENPNSTDGSTSVVSVHLAWLILVLLCKLDGKAKLYKDVSLAYLFLANNLSFIVENVRMTNLICLLGDHWVARHVKSVKLYASSCESVTWTKVLSALPEKGSKTVVPEFAMACFRKFKTALEDAYRNQMSWIVEDGKLREDLKLSIACKLVPKYQDFYDTYLVKFRGEIENNLESLAWFSPNDLSNYLSHLFHGASTLGST. 618
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08132 617 Gene3D Exocyst complex component Exo70 60 614 - -
Seca8g08132 617 Pfam Exo70 exocyst complex subunit 243 605 IPR046364 GO:0000145|GO:0005546|GO:0006887
Seca8g08132 617 SUPERFAMILY Cullin repeat-like 62 609 IPR016159 -
Seca8g08132 617 PANTHER EXOCYST COMPLEX PROTEIN EXO70 34 610 IPR004140 GO:0000145|GO:0006887
Seca8g08132 617 MobiDBLite consensus disorder prediction 135 155 - -
Seca8g08132 617 MobiDBLite consensus disorder prediction 140 155 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08132 Seca-Chr8 178819815 178821668 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08132 14 610 EXO70 exocyst subunit family AT2G39380 50.744 0.0 551
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08132 K07195 - cave:132188283 716.842