Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08126 ATGTTTCGGTTACTTTGTTTATTTTTTATTTTGTTTTCAGGTCCATTTTCCCAAAGGGTACTCTTAACTTTGGAGGAGAAGAAAATCACATACAATCTCCACCTAATTGATATCAGTAACAAACCCCAATGGTATTGTATCATATCGTATCGTACCCGCAATATGCCTTTTCTTCTCTGTGGGATGATAAATCAAGTTTTTCTTTTGGTTATTGGTAGGTTTTTGGATGTGAACCCTGAAGGGAAGGTGCCAGTGGTTCAGTTTGATGGCAAATGGGTGCCTGATTCTGATGTTATTGTGGGGATACTCGAGCAAAAATACCCACAACCCTCTCTCGTCTCTCCTTCTGAATTTGCCTCCGTGGGATCAAAGATATTTGGGTCTTTCGTGAGTTTTCTGAAGAGCAAGGATGCAAATGATGGAACAGAGCAAGCTTTGGTTGCTGAATTGAACGCTTTGGAGGAACATCTTAAGGCCCATGGTCCATATGTTGCTGGGGCGAACGTTACTGCTGTTGATTTGAGTTTGGCACCAAAACTGTACCATCTAGTAGTAGCACTTGACCACTTCAAGAATTGGACTATTCCTGAAAGTTTGACACATGTCCACAACTACACCAAGTTGCTGTTCTCCCGGGAATCATTTGAGAAAACCAAGGCTGAAAAGGAATATGTTATTGCCGGGTGGGCGCCAAAGGTCAATGCATGA 708 0.4209 MFRLLCLFFILFSGPFSQRVLLTLEEKKITYNLHLIDISNKPQWYCIISYRTRNMPFLLCGMINQVFLLVIGRFLDVNPEGKVPVVQFDGKWVPDSDVIVGILEQKYPQPSLVSPSEFASVGSKIFGSFVSFLKSKDANDGTEQALVAELNALEEHLKAHGPYVAGANVTAVDLSLAPKLYHLVVALDHFKNWTIPESLTHVHNYTKLLFSRESFEKTKAEKEYVIAGWAPKVNA. 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08126 235 Gene3D Glutaredoxin 11 68 - -
Seca8g08126 235 ProSiteProfiles Soluble glutathione S-transferase N-terminal domain profile. 4 111 IPR004045 -
Seca8g08126 235 Gene3D - 113 235 - -
Seca8g08126 235 Pfam Glutathione S-transferase, N-terminal domain 15 104 IPR004045 -
Seca8g08126 235 Pfam Glutathione S-transferase, C-terminal domain 139 205 - -
Seca8g08126 235 Gene3D Glutaredoxin 72 112 - -
Seca8g08126 235 CDD GST_N_family 8 100 - -
Seca8g08126 235 PANTHER GLUTATHIONE S-TRANSFERASE DHAR2-RELATED 14 232 IPR044627 GO:0033355|GO:0045174|GO:0098869
Seca8g08126 235 FunFam Glutathione S-transferase DHAR3, chloroplastic 113 235 - -
Seca8g08126 235 SUPERFAMILY GST C-terminal domain-like 106 233 IPR036282 -
Seca8g08126 235 CDD GST_C_DHAR 112 232 - -
Seca8g08126 235 SUPERFAMILY Thioredoxin-like 11 112 IPR036249 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08126 Seca-Chr8 178752054 178756432 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08126 10 235 Glutathione S-transferase Gene Family AT1G75270 65.198 1.10e-101 292
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08126 K21888 - gmx:100306061 327.405