Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08092 ATGGAAGAGATAGGTTCGGGGACAGCAATAAACCCTTCCAATATAGGGTTTCAGCTATTGAAGAAGCATGGTTGGAAAGAAGGAACTGGTCTTGGGATCTCTGAGCAGGGTAGATTAGAACCCGTGGAAACTCATGTGAAGAATAACAAACGAGGTTTGGGAGCGGATCAAGTGAAGAAAAAGGCCGTGAAGCCTGATCATAGTGATGCCTCTAAAGGGAACAAAAAGCAGGTAGGAAAGAAAACCAAATCACTTTCTAAACGGATGAGAAAGATGCAGGAGTATGAAAAGAAGATGCAAGAGAAGGAATTTGAGCGCGCATTCTTTAGAGAGTTCTGGCCAGAAAATGTGTAA 354 0.4294 MEEIGSGTAINPSNIGFQLLKKHGWKEGTGLGISEQGRLEPVETHVKNNKRGLGADQVKKKAVKPDHSDASKGNKKQVGKKTKSLSKRMRKMQEYEKKMQEKEFERAFFREFWPENV. 118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08092 117 Coils Coil 85 105 - -
Seca8g08092 117 ProSiteProfiles G-patch domain profile. 12 58 IPR000467 GO:0003676
Seca8g08092 117 PANTHER BAT4 PROTEIN-RELATED 6 117 IPR039146 -
Seca8g08092 117 MobiDBLite consensus disorder prediction 31 94 - -
Seca8g08092 117 SMART G-patch_5 10 56 IPR000467 GO:0003676
Seca8g08092 117 Pfam G-patch domain 13 55 IPR000467 GO:0003676
Seca8g08092 117 MobiDBLite consensus disorder prediction 40 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08092 Seca-Chr8 178502125 178504169 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08092 1 113 C2H2 Transcription Factor Family AT5G26610 29.661 1.24e-09 52.4
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08092 8 178502125 178504169 Seca8g08092 8 178502125 178504169 ECH