Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08079 ATGCAAGGACTAGTTGAGGAGGTTGACATCGGAGAAAAGGTTGATGTAATAATTTCAGAATGGATGGGCTATATGCTCCTATATGAGGGCATGCTTGGAAGTATTATTACGGCAAGGGATCGTTGGCTCAAACCTGGAGGTCTAATTCTTCCTTCAAATGCAACGTTGTACATTGCTCCTTTCACACACCCTAAAAGATACCGTGACAGCATTGACTTCTGGCGCAATGTTCATGGCGTTGATATGTCTGTCTTAATACCAACAGCAAAACAAAGTGCCTTTGAAGAACCTCAAGTCGAGACAATTCCGAAAGAAAACATGTTGCAATGGCCGCATGTGGTGAGATATATCAACTGTTATACTGTTACCATTCCTGAGTTAGAATGTGTAACATCAACGTTTACTTTCAACTCATCAATCCGAGCACCACTACATGGTTTTGCATTATGGTTTGATGTTGGATTTACTGGGCATGTGACATCACCATTGCCAATCACTTATGGTAGTCCGAGTTCGAAACGGAAAAACCTTGCTGATGCACTGATCCTGTCCACTGCGCCTGATGAGCTGCCAACACATTGGCAACAGACTTTAATATTCTTTGAGGATCCGATCGAGGTGGAAACAGATCAACTTATTGAAGGATCAGTGACATTGTCACAAAACGAAGTGCATCATCGTTATATGGATATTCACCTTCAATATGCTTACCGTGGTCATTCCCTTGAGAAATTTACTGTTTTCAAATGA 750 0.416 MQGLVEEVDIGEKVDVIISEWMGYMLLYEGMLGSIITARDRWLKPGGLILPSNATLYIAPFTHPKRYRDSIDFWRNVHGVDMSVLIPTAKQSAFEEPQVETIPKENMLQWPHVVRYINCYTVTIPELECVTSTFTFNSSIRAPLHGFALWFDVGFTGHVTSPLPITYGSPSSKRKNLADALILSTAPDELPTHWQQTLIFFEDPIEVETDQLIEGSVTLSQNEVHHRYMDIHLQYAYRGHSLEKFTVFK. 250
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08079 249 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 2 239 IPR029063 -
Seca8g08079 249 ProSiteProfiles SAM-dependent methyltransferase PRMT-type domain profile. 1 232 IPR025799 GO:0016274|GO:0018216
Seca8g08079 249 Gene3D Vaccinia Virus protein VP39 1 51 IPR029063 -
Seca8g08079 249 Gene3D - 53 249 - -
Seca8g08079 249 PANTHER PROTEIN ARGININE N-METHYLTRANSFERASE 2 236 IPR025799 GO:0016274|GO:0018216
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08079 Seca-Chr8 178348868 178352591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08079 4 216 C2H2 Transcription Factor Family AT3G12270 36.486 5.19e-37 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08079 K11437 - mnt:21405865 340.502