Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08064 ATGTCTCAGACATCCAGTGTCCCGCCTGTGTTCCAGTCTATCAAATCATTGCCTCCTGAGTTCAAGTTTACTAATAATCCAAACGCTGGTCTTGTGGCAAAACATGGAAATATTAAACTGAGAAGCACTGATCTGATTGGATCAAACGGTCTTGAAAATGGTGCACTAGGAGGATTGGTTTCTAAGGAAGTTCACAGCCGAGGTGGTGACATGGATCTTTTTGATGAGGAATCGCCATATGGCGGAAAAGGTAGATCATTTGATGACAGGCCAACAAATGCTGATGAAGACTCGGTTTCTGATTCGTTGCCCCTCCCATCAATTTCAACATCCTCTAGAGAAAGCAGATGGAGTGATACAACTCCTTATGCTTCAAAGAAGAAGCTTCAGTCTTGGCTTCAACTTTCTAATGGGGATTGGGAGCTGGTGAAGATAATATCCACTTCTGGAACAGAGTCTATCATTTCACTGCCTGATGGGAAAGTTTTAAAGGTGAAAGATGAAAATTTGGTGCCGGCAAATCCCGATATTCTTGATGGAGTGGATGATCTCATGCAACTTAGTTATTTAAACGAACCGTCAGTTTTATACAACCTGCAATATAGATACAATCAAAATATGATCTATACAAAAGCAGGGCCTGTTTTGGTTGCCATAAATCCCTTTAAGAAAGTTCCTCTTTATAGTAATGACTATATTGAAGCCTACAAACGTAAAGCAATTGAAAGCCCTCATGTATATGCAATTACAGACACAGCCATCAGAGAAATGATACGGGATGAAGTTAATCAATCAATAATTATAAGCGGCGAGAGTGGAGCAGGGAAGACCGAGACAGCAAAAATAGCAATGCAGTACTTGGCTGCCCTTGGTGGTGGAAGTGGAATTGAGTATGAGATATTAAAGACTAATCCAATACTTGAAGCCTTTGGTAATGGCAAAACATTGAGAAATGACAACTCAAGTCGTTTTGGAAAGCTCATTGAGATTCACTTCAGCGAAACTGGAAAAATATCTGGTGCAAATATTCAAACATTTTTGTTGGAAAAGTCTAGAGTAGTCCAATGCAATGAAGGGGAAAGGTCATATCATATATTTTATCAGCTATGTGCTGGAGCACCACCATCTCTAAGGGAGAAGCTAAATCTACAAAGTGCGGAAGACTATAAATATTTGAGGCAGAGCAATTGTTATTCAGTTAGCGGTGTTGATGATGCAGAAGAATTTCGTGTAGTCATGGAAGCTCTGGATGTTGTCCACATTAGCAAAGAAGACCAGGAGAATGTATTTGCAATGCTTGCCGCAGTATTATGGTTAGGAAACATATCATTTACTGTGATCGATAATGAAAATCATGTTCAAGCTGTTGAGGATGAGGGGCTGTTCAGCGCTGCCAAGTTGATTGGTTGTGACATTGAAGATCTGAAGTTGACTTTATCAACTCGCAAAATGAAAGTTGGTAATGATATCATTGTGCAGAAGTTGACACTGTCTCAGGCTATTGATGCGAGAGATGCTTTGGCGAAGTCAATATATGCATGTCTGTTTGATTGGCTGGTTCAACAAATAAACAAATCACTTGCTGTTGGCAAAAGACGCACTGGCAGATCTATCAGTATTCTGGATATTTATGGCTTTGAGTCGTTCAATAGGAACAGTTTTGAGCAGTTCTGCATAAATTATGCAAATGAAAGATTGCAGCAACACTTTAATCGTCATTTATTCAAGTTAGAACAAGAGGAGTATATCCAAGACGGCATTGATTGGACTAAAGTTGAATTTGAAGACAACCAAGACTGCCTTAATCTTTTTGAAAAGAAACCACTGGGGCTGCTATCTCTGTTAGATGAAGAGTCCACTTTCCCAAATGGCACAGATTTAACATTTGCTAACAAGCTTAAGCAGCATTTGAATTCTAATTCATGCTTCAAAGGAGAACGAGAAAAAGCCTTTACTGTGTGTCATTATGCAGGGGAGGTCACTTATGATACAACTGGATTCCTGGAGAAGAACAGGGACCTATTGCACTTGGATTCCATCCAACTTCTATCTTCAAGCAAATGTCATCTTCCTCAGATATTTGCATCCCATATGCTTACTCAGTCTGAGAAGCATGTAGTTGGTCCCTTACACAAGTCAGGTGGGGCAGATTCCCAAAAGCTAAGTGTAGCCACAAAATTCAAGGGACAATTGTTTCAACTGATGCAACGTTTAGAAAATACCACACCACATTTTATTCGCTGCATTAAGCCCAATAACCTCCAATCACCTGGATCATATGAGCAAGGCCTTGTACTGCAGCAGTTGAGATGTTGTGGGGTCCTGGAAGTGGTTCGAATATCAAGATCGGGCTTTCCAACTAGAATGTCTCACCAAAAGTTTGCCAGAAGATATGGCTTTCTTCTCCTTGAAAATGTCGCATCCCAGGATCCACTCAGTGTTTCAGTTGCGATTCTTCATCAGTTTAACATTTTGCCTGAGATGTATCAAGTTGGCTACACGAAATTATTCTTCCGAACAGGGCAGGTAAATAGATGTCTAAATAACTTCCACACACTATTTCATTTCATTTAA 2574 0.4005 MSQTSSVPPVFQSIKSLPPEFKFTNNPNAGLVAKHGNIKLRSTDLIGSNGLENGALGGLVSKEVHSRGGDMDLFDEESPYGGKGRSFDDRPTNADEDSVSDSLPLPSISTSSRESRWSDTTPYASKKKLQSWLQLSNGDWELVKIISTSGTESIISLPDGKVLKVKDENLVPANPDILDGVDDLMQLSYLNEPSVLYNLQYRYNQNMIYTKAGPVLVAINPFKKVPLYSNDYIEAYKRKAIESPHVYAITDTAIREMIRDEVNQSIIISGESGAGKTETAKIAMQYLAALGGGSGIEYEILKTNPILEAFGNGKTLRNDNSSRFGKLIEIHFSETGKISGANIQTFLLEKSRVVQCNEGERSYHIFYQLCAGAPPSLREKLNLQSAEDYKYLRQSNCYSVSGVDDAEEFRVVMEALDVVHISKEDQENVFAMLAAVLWLGNISFTVIDNENHVQAVEDEGLFSAAKLIGCDIEDLKLTLSTRKMKVGNDIIVQKLTLSQAIDARDALAKSIYACLFDWLVQQINKSLAVGKRRTGRSISILDIYGFESFNRNSFEQFCINYANERLQQHFNRHLFKLEQEEYIQDGIDWTKVEFEDNQDCLNLFEKKPLGLLSLLDEESTFPNGTDLTFANKLKQHLNSNSCFKGEREKAFTVCHYAGEVTYDTTGFLEKNRDLLHLDSIQLLSSSKCHLPQIFASHMLTQSEKHVVGPLHKSGGADSQKLSVATKFKGQLFQLMQRLENTTPHFIRCIKPNNLQSPGSYEQGLVLQQLRCCGVLEVVRISRSGFPTRMSHQKFARRYGFLLLENVASQDPLSVSVAILHQFNILPEMYQVGYTKLFFRTGQVNRCLNNFHTLFHFI. 858
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08064 857 Gene3D Myosin VI head, motor domain, U50 subdomain 418 526 - -
Seca8g08064 857 FunFam Unconventional myosin-XIX 549 741 - -
Seca8g08064 857 Pfam Myosin head (motor domain) 181 839 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca8g08064 857 MobiDBLite consensus disorder prediction 97 120 - -
Seca8g08064 857 MobiDBLite consensus disorder prediction 70 96 - -
Seca8g08064 857 ProSiteProfiles Myosin N-terminal SH3-like domain profile. 126 175 IPR004009 GO:0003774|GO:0005524|GO:0016459
Seca8g08064 857 ProSiteProfiles Myosin motor domain profile. 179 855 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca8g08064 857 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 154 847 IPR027417 -
Seca8g08064 857 PANTHER MYOSIN 172 845 - -
Seca8g08064 857 MobiDBLite consensus disorder prediction 70 120 - -
Seca8g08064 857 Gene3D - 785 847 - -
Seca8g08064 857 SMART MYSc_2a 173 849 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca8g08064 857 CDD MYSc_Myo8 193 839 IPR036022 -
Seca8g08064 857 Gene3D - 361 417 - -
Seca8g08064 857 Gene3D - 549 741 - -
Seca8g08064 857 PRINTS Myosin heavy chain signature 537 565 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca8g08064 857 PRINTS Myosin heavy chain signature 590 618 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca8g08064 857 PRINTS Myosin heavy chain signature 209 228 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca8g08064 857 PRINTS Myosin heavy chain signature 263 288 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca8g08064 857 PRINTS Myosin heavy chain signature 305 332 IPR001609 GO:0003774|GO:0005524|GO:0016459
Seca8g08064 857 FunFam Myosin heavy chain 361 417 - -
Seca8g08064 857 Gene3D Kinesin motor domain 178 784 IPR036961 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08064 Seca-Chr8 178218178 178232575 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08064 7 857 Myosins gene family AT1G50360 77.347 0.0 1352
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08064 - - gmx:100801124 1519.98
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g08064 8 178218178 178232575 Seca8g08064 8 178218178 178232575 ECH