Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g08039 ATGATGTTGATGCCTTGCCATGAATTGTTCAAGCCAGTTTTTATTATGATTCTGGTTAACTTAGCTCTGGCTTTTGTTAATGTCCTTCTGAAGAAGGTTCTTAATGAAGGAATGGACTACATGTCCATTGTAACATATCGACAGGCAATTTCATTTATTTTCATGGCACCTATTGCCTGTTTCTATGAAAGGAAACACAAACTTGAGGCTCAGATAATGTGCCTCCTTTTCCTTTCTGCTCTTGTTGGAGTAACACTCCCACAATACCTGTTTCTTCTTGGACTTGAATATACATCTGCTACATTCTCATGTGCGTTCCTAAACATGGTGCCTGTATTTACGTTCATTATGGCACTGCCCTTCGGGATAGAGAAGGTGAACATGAAAAACAAGAGTGGTAAAGCCAAAGTCTTGGGAACTTTTGTGTGCATTGGTGGAGCCTTGTTGTTGGCCCTTTATAAAGGAATGCCCTTTATTCACCCTCAATCGCAACACATAGCAAACAAAGCTACAAGTACACCTCCATCTGCCAAGTTAGAGAAATGGATTGTTGGTTCAATACTACTAACTGTAGGTTGCCTCTTGTGGTCTTCATGGTTTATTATACAAGCAAAGATTAGCAAAAAATATCCATGTCAATACTCTAGCACAGCCATTTTGTCCCTTTTTGCTGCCATTCAATCAGCAATAACAACTTTGATCATCAAGGGAAATAGTGCCTCGTGGATTCTCAAAGGAAAGCTAGAAATAATGAGTGTTATATATGCTGGATTGGTAGGATCAGGCTTGTGCTATGTTGCAATGTCATGGTGTGTCAAACAAAGGGGTCCAGTTTTTACTTCAGCATTTACCCCACTGATACAGATATTTGTGGCCGTGCTTGATTTCTCTATACTAAAGGAGGAAATTTACCTGGGAAGGTTGATTCCTCTTATCACTATTCTATGA 948 0.3956 MMLMPCHELFKPVFIMILVNLALAFVNVLLKKVLNEGMDYMSIVTYRQAISFIFMAPIACFYERKHKLEAQIMCLLFLSALVGVTLPQYLFLLGLEYTSATFSCAFLNMVPVFTFIMALPFGIEKVNMKNKSGKAKVLGTFVCIGGALLLALYKGMPFIHPQSQHIANKATSTPPSAKLEKWIVGSILLTVGCLLWSSWFIIQAKISKKYPCQYSSTAILSLFAAIQSAITTLIIKGNSASWILKGKLEIMSVIYAGLVGSGLCYVAMSWCVKQRGPVFTSAFTPLIQIFVAVLDFSILKEEIYLGRLIPLITIL. 316
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g08039 315 SUPERFAMILY Multidrug resistance efflux transporter EmrE 46 154 - -
Seca8g08039 315 Pfam EamA-like transporter family 12 150 IPR000620 GO:0016020
Seca8g08039 315 Pfam EamA-like transporter family 185 314 IPR000620 GO:0016020
Seca8g08039 315 PANTHER WAT1-RELATED PROTEIN 12 308 IPR030184 GO:0016020|GO:0022857
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g08039 Seca-Chr8 178000793 178003033 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g08039 8 256 Nodulin-like Gene Family AT3G30340 47.410 6.31e-84 253
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g08039 - - gmx:100802053 536.184