Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07986 ATGATTTTTGGACAGAGGGTTCCTCCAAATTTTGTGAGTAGATATTGGAGTGGAATGTCGAATCCTGTACACTTTCTGCTCCCTGACGGTGCTAAATGGGAAATGACTTGGAAGAAATTTGCAAAATTTTATTCTTTGGATCATCAACATCTTTTGATGTTCAAATACGAAAGGAAGTCACAGTTTCAGGTTGTGATATGTGATCAAAGTTTCTTGGAAATAGGGTACCCTGTGTTCATTGGAACCTTTGGTGTTGAAGAAATCAGTGATCAGAGTGGCAACTCGAGAGAAATTTTTGATGGTTTTTCAACTCCCCGAAATAAAAGGCCAAATTCTTCTCCCCAAACTGAAAGAGTTCTTGAGCCAAAAAGTACAGGTAGATTTTCTTTTTTCCTTGTGTTGTTTCTATTCTGA 414 0.3768 MIFGQRVPPNFVSRYWSGMSNPVHFLLPDGAKWEMTWKKFAKFYSLDHQHLLMFKYERKSQFQVVICDQSFLEIGYPVFIGTFGVEEISDQSGNSREIFDGFSTPRNKRPNSSPQTERVLEPKSTGRFSFFLVLFLF. 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07986 137 PANTHER B3 DOMAIN-CONTAINING 6 104 - -
Seca8g07986 137 Gene3D - 4 71 IPR015300 -
Seca8g07986 137 SUPERFAMILY DNA-binding pseudobarrel domain 5 69 IPR015300 -
Seca8g07986 137 MobiDBLite consensus disorder prediction 99 118 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07986 Seca-Chr8 177488359 177488814 Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07986 6 78 B3 DNA Binding Superfamily AT4G01580 31.395 2.42e-09 51.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07986 - - ccaj:109795879 98.2117