Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07965 ATGGAGCTTTCTGCATTCCCCAGCTTCAAAGCTGTTTCTAATGCTTCCTTATTCCCATTTTCCTCGAATCAAGTTTGGTGCCGATGCTCTCTTCGTCCTCGTCGCCGCGATTATGGCTACCGTTGGAGTCACAGTTCAAAACCGTTTGTTCCGATCAGGATGTGCTCGGAGAAAGGTTCAGCATCGAACGGTTACGGTGGAATCGAGAGCAATGAAGCGAAATCTGATTTCGTCGAAGTGATTAGCATTGGCAGTAGGAAGGACGCGGTTCTTGATTTCTGCTTGAACTCGCCGTTTCAGTTATCGTCCCTGCGGTTTTGGAATATCCTTATGAAAGAATCACAAGAGGTGCAATTACAGCAAAGGTCATTTAAAAAAGAAACTTGCCCCGGAATTGTCAAAGCTCCAGTATTTATGAAGTCATGCTCAAAGACTATTGTCCTTGTGGCTAGTGCAGGATATGGATTGGACCACACTGTTGCTGTTGATATTTTTGAAACTGTAAGGTCCACAAATGGACTAACAGTTGCTATAATTTTGAAGCCTTTTAGCTTTGAAGGGTTAAGACGACAAGATGAGGTTAAAGCTTTGATGGGGAAACTTAAGGAGAATACTAATTTGCTTATTGAAATTGATATTGATGCACTGCTCAAAAAAGACTTGTTGACTCTAGATGAGGCTATGAAGACTGCTAATGATGCAGTTTTGCTAGCTATTAAGGCCATATCTGTTCTAAAATCTGAGATGCACAGAAAATTTATAGATAGATTTCACGATAGCATGAAACAAGCCAGCACTTCAGAAATTAATAAAATATTGGAATGCTATAAAGAAGCAAGAATTGGATTTGGAGCTGCATATAACATCAAAACTTCAATTTTGCAGTCTATATTTGATTGTCCGTTCCTGGGTGTTTCTTTGAAGGATCCAAATAGCATGGTTATATGCATTCTTGCATGTTCTGTACCCATCAATGATAATGATATAGCAGTCTTTCTGCGTACTTTCCGTCAAACAACAGAATACACGGGTGACATTATAATATCAACAATACTTGAGCCTGATGTCGAGCCCAACCTACTGATAACAACAGTACTTACACTTGACTTAAATGTGCAACAGTCCTCCCAGAATGGTGGTATACTCTCGAGACTTGCCCTGCATTTTCCTCTTGTTTTTAGCTTTTGGGGAAGACATAATCAGCAACAAATTGGCACTGGTAAAGAGAATGCAGTATCTCCTCATGAAATGATGAGTTCTTATGACATTGATGAGGGGGCTGATGAGATTGCTCCCGATGTCATAGATGACAGATTTGAAAAGTACTATGAAGAGTTGGAGCCGGCAGTGAGCAACCACAGCTCAAAGTTGTCCACTTCAAGGGATTCTGAAAAAAATGGAGACTTGTTTGACACCATAGCCAGTTATCCTATCCTTTATGACTCCAATACTGAAGAAGTTGCATTAGGTGACTCTGCTTTTCAAAGGGAACAACTTGAAAACTGGAATCTTGGTCCTGGATTTGAAGTGGCAAAGGAGTGGGCCCAAGAAAGGGCAGCCGATGCTACTCCCATGGTTGATAACCTAAGCATCTTTCACCTTCCTGTTGGTGTGAGGCATTCAGAAGAGTTGAAAGACTGTTTAAAAATCTCATTTATGACAAAACAGCATGAGCCAGAAACTGAAAATGACACAAAAATATCAACATTAAATGGAGGTTTGTCTCCTTGGAGTACAGTGACTGATGTGGGTCTGGAAGCAGTGATGGAGTTTACATCTTCAATTTTGAAGAGAAAGTATGCTAATAAACCAAAGAAGCATGGAGTTCTATCTGTTCGTGCTTCATCTATGCTGGAGGCGGAACGTGATTTGTCAAAAAAGTGGAGTCCTGTTGTGGAAATGCAATATAGGGGAGGAAGATACAAGGGACGATGCCAAGGAGGTCTGCCAGAAGGGAAGGGACGTCTTGTTCTTGGAGATGGAAGTATATATGATGGTGTATGGCGCTATGGTAAGAGATCTGGTCCAGGTACATTCTATTTCAAAAACGGAGATATGTTTCAAGGATCATGGAGGGACGATGTTATGCATGGCAAGGGATGGTTTTATTTTCACACTGGTGATCGGTGGTTTGCAAACTTTTGGAAGGGAAAGGCAAATGGGGAGGGGAGGTTCTACACAAAGTCTGGTGATGCCTTCTTTGGCAATTTCAAAGATGGATGGCGGCATGGCCAGTTTCTTTGTATTAATGCTAATGGGACAAGGTACACAGAAATTTGGGAACATGGTGTTCTCTTAGACAGCAAGCATTTAGATAAATGA 2322 0.413 MELSAFPSFKAVSNASLFPFSSNQVWCRCSLRPRRRDYGYRWSHSSKPFVPIRMCSEKGSASNGYGGIESNEAKSDFVEVISIGSRKDAVLDFCLNSPFQLSSLRFWNILMKESQEVQLQQRSFKKETCPGIVKAPVFMKSCSKTIVLVASAGYGLDHTVAVDIFETVRSTNGLTVAIILKPFSFEGLRRQDEVKALMGKLKENTNLLIEIDIDALLKKDLLTLDEAMKTANDAVLLAIKAISVLKSEMHRKFIDRFHDSMKQASTSEINKILECYKEARIGFGAAYNIKTSILQSIFDCPFLGVSLKDPNSMVICILACSVPINDNDIAVFLRTFRQTTEYTGDIIISTILEPDVEPNLLITTVLTLDLNVQQSSQNGGILSRLALHFPLVFSFWGRHNQQQIGTGKENAVSPHEMMSSYDIDEGADEIAPDVIDDRFEKYYEELEPAVSNHSSKLSTSRDSEKNGDLFDTIASYPILYDSNTEEVALGDSAFQREQLENWNLGPGFEVAKEWAQERAADATPMVDNLSIFHLPVGVRHSEELKDCLKISFMTKQHEPETENDTKISTLNGGLSPWSTVTDVGLEAVMEFTSSILKRKYANKPKKHGVLSVRASSMLEAERDLSKKWSPVVEMQYRGGRYKGRCQGGLPEGKGRLVLGDGSIYDGVWRYGKRSGPGTFYFKNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKANGEGRFYTKSGDAFFGNFKDGWRHGQFLCINANGTRYTEIWEHGVLLDSKHLDK. 774
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07965 773 Gene3D - 712 770 - -
Seca8g07965 773 Gene3D - 639 696 - -
Seca8g07965 773 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 102 767 - -
Seca8g07965 773 SMART morn 662 683 IPR003409 -
Seca8g07965 773 SMART morn 639 660 IPR003409 -
Seca8g07965 773 SMART morn 685 706 IPR003409 -
Seca8g07965 773 SMART morn 731 752 IPR003409 -
Seca8g07965 773 SUPERFAMILY Tubulin nucleotide-binding domain-like 80 244 IPR036525 -
Seca8g07965 773 PRINTS Cell division protein FtsZ signature 267 288 IPR003008 GO:0005525
Seca8g07965 773 PRINTS Cell division protein FtsZ signature 173 194 IPR003008 GO:0005525
Seca8g07965 773 Pfam MORN repeat 646 662 IPR003409 -
Seca8g07965 773 Pfam MORN repeat 687 709 IPR003409 -
Seca8g07965 773 Pfam MORN repeat 734 745 IPR003409 -
Seca8g07965 773 Pfam MORN repeat 664 686 IPR003409 -
Seca8g07965 773 Gene3D Tubulin/FtsZ, GTPase domain 120 368 IPR036525 -
Seca8g07965 773 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 638 764 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07965 Seca-Chr8 177286129 177306836 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07965 1 772 PP2C-type Phosphatase Gene Family AT1G75010 45.674 0.0 642
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07965 - - gsj:114371951 1256.51