Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07948 ATGGCGCCGAAGAAAGACAAGGCTCCTCCACCATCTTCTAAACCCGCGAAGTCAGGTGGTGGGAAGCAGAAGAAGAAGAAATGGAGCAAGGGAAAACAAAAGGAAAAAGTGAACAATATGGTTTTGTTTGATCAAGCTACTTACGACAAGCTTCTTTCCGAAGCTCCCAAATACAAGTTGGTTACACCTTCAGTCTTATCTGACAGATTGCGGATTAATGGTTCATTAGCACGCAGAGCAATCAAGGATTTGATGGCAAGGGGATCAATCAGAATGATTTCTGCTCATTCGAGCCAGCAAATCTACACCCGGTCCACCAACACTAATTAG 330 0.4424 MAPKKDKAPPPSSKPAKSGGGKQKKKKWSKGKQKEKVNNMVLFDQATYDKLLSEAPKYKLVTPSVLSDRLRINGSLARRAIKDLMARGSIRMISAHSSQQIYTRSTNTN. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07948 109 PANTHER 40S RIBOSOMAL PROTEIN S25 1 108 IPR004977 -
Seca8g07948 109 Pfam S25 ribosomal protein 7 104 IPR004977 -
Seca8g07948 109 MobiDBLite consensus disorder prediction 1 36 - -
Seca8g07948 109 FunFam 40S ribosomal protein S25 21 109 - -
Seca8g07948 109 Gene3D - 21 109 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07948 Seca-Chr8 177137463 177140392 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07948 1 107 Cytoplasmic Ribosomal Protein Gene Family AT4G34555 89.720 7.88e-55 164
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07948 K02975 - zju:107434163 158.688