Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07931 ATGGGTAAGAGTAAGAAAACATTGAAGCTACCTTCTCTGTTCAAAACCAAGGAAGCACCAAAAAAACACCCTTGGCAACAATTGTTACCCTCTTGTGGCCACCCAAAAACCCTCTCTTTCCGATGTGGGACTGGGGATGACATTTTCAAAACAGTTAACTCTGTATTTTTTGACCCAACAGAGAGCACCATTGAAACTCCTAAATCCTGCTTCACAACCTCCTCTGAATGTGCAAGCTTTTCAACAGAATCAGAGGATTACTGCTACTATGATGGTGAATCTTTGGAGACATTGGTACGTGGGGTGAGGTCAGAGAGGCTGTTTTTTGAACCAGGTGGTGACACAAGCTCGATCTTGGAAGAGGCTAAGGCTAGTGGATTTCCATACAAAGAGAGTGTGGTGATGGCTATGGAGTCAGAGGATCCTTATGAGGATTTTAAGAAATCAATGGAGGAGATGATTGAGTCTCATGGAGTGAAGGATTGGGAGGGATTGGAGGAGCTATTGAGTTGGTATTTGAGGGTAAATGGTAAGAACAATCATGGGTACATAGTGGGTGCTTTTGTGGATTTACTCATTAGTATAGCAGCTTCTAATCATTCTAACTCTTGCTCTGATTCAACTACATATTCTTCTGCTGTTTCTTCTTTGCCTCCTTCACCATTGTATCCATCTCAGGGCCAGAATGAGATTGTTGAGCTTGAACATGAAGATGCTGTAACGTCTTAG 729 0.4252 MGKSKKTLKLPSLFKTKEAPKKHPWQQLLPSCGHPKTLSFRCGTGDDIFKTVNSVFFDPTESTIETPKSCFTTSSECASFSTESEDYCYYDGESLETLVRGVRSERLFFEPGGDTSSILEEAKASGFPYKESVVMAMESEDPYEDFKKSMEEMIESHGVKDWEGLEELLSWYLRVNGKNNHGYIVGAFVDLLISIAASNHSNSCSDSTTYSSAVSSLPPSPLYPSQGQNEIVELEHEDAVTS. 243
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07931 242 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 12 195 IPR038933 GO:0045892
Seca8g07931 242 NCBIfam uncharacterized plant-specific domain TIGR01568 133 195 IPR006458 -
Seca8g07931 242 MobiDBLite consensus disorder prediction 207 226 - -
Seca8g07931 242 Pfam Transcriptional repressor, ovate 139 195 IPR006458 -
Seca8g07931 242 ProSiteProfiles OVATE domain profile. 135 194 IPR006458 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07931 Seca-Chr8 176978872 176979600 Dispersed/Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca8g07931 Ovate 3.9e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07931 - - gmx:100527123 338.191
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g05112 8 141102176 141102967 Seca8g07931 8 176978872 176979600 ECH
Seca8g07931 8 176978872 176979600 Seca8g07931 8 176978872 176979600 ECH