Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07927 ATGGCGATTAGAGGTGTTGGCTCCATGGCTGCCGACACCAAGCTCCTTCTCATCCAACTCATCACCGGTCGATGGTTCGTCGTCTTTGCCTCCTTCCTCATCATGGCAGCCTCCGGAGCCACCTACATGTTCAGCCTTTACTCCAGCGACATCAAAACTTCCCTTGGCTACGACCAAACCACTCTCAACCTCCTTAGTTTCTTCAAAGACTTAGGTGGCAACCTCGGTGTCCTCTCTGGCCTAATCAACGAGATCACCCCACCCTGGGTTGTTCTCGCTATGGGCTCTGTTCTCAACTTCTTCGGCTACTTCATGATATGGCTTGCAGTCACCGGAAGAATACCCAAACCTCATGTATGGCACATGTGTCTCTACATCTGCATAGGTGCTAATTCCCAATCCTTTGCCAACACTGGTTCCCTTGTCACTTGTGTCAAGAACTTCCCAGAAAGTCGTGGGGTTGTCTTAGGCATTCTCAAAGGCTATGTGGGTCTTAGTGGTGCTATCATCACTCAACTCTACTTTGCTATTTACTACAATGACACTAAAGCTCTGATTTTGCTCATAGCTTGGCTTCCCGCTGCTATTTCCTTTGCTTTCCTTCGAACCATTCGCTACATGAAACCTGTTCGACAGCCTAATGAACTCTCTGTTTTCTATAAATTCTTGTACATTTCACTTGGCCTTGCTGGGTTTCTTTTGGTTATGATTGTATTACAGAAAAAGGTGTCTTTTAAACAGAGTGAGTATGGTGGAAGTGCTGCTGTGGTGCTTTTCTTGCTCTTCCTCCCTCTTGCTGTTGTTTTTTCTGAACAGTTTAAGATCCGACAGAGTCAAAAGCTTGCATTTGTTGTTGATCCTTTGCCGGTGAAGATAGTAACTTCAGGGGAGATGGTAAAACAAGAGGAGTATGCTAATGCTAATGCTAATGCAAATGCAAATGCTAACTCTAACTCTGTTTCTGCACCGACATCATCATCAACTAGGTGGTGGCAAAATGTGTTTAGTCCACCTGTTAGAGGTGAGGACTATACCATACTTCAAGCCCTTTTCAGCATTGACATGATATTGCTATTTTTTGCTAGCACATGTGGTGTTGGGGGTACTTTGACTGCAATTGACAATCTGGGTCAGATTGGGACTTCACTTGGGTACCCAAAGGCAAGCATAAGCACATTTGTGTCACTAGTGAGCATTTGGAATTATCTAGGAAGGGTTTTTTCTGGGTTTGTTTCTGAACATTTTCTTACAAAGTACAAATTTCCTAGACCTCTTATGCTCACGTTGACTCTGCTCTTATCTTGTCTTGGTCATCTTCTCATAGCCTTTGATGTGCCTAATGGTCTCTATGTGGCTTCAGTGATCATTGGGTTTTGTTTTGGTGCACAGTGGCCTTTAGTCTTTGCAATAATTTCGGAGCTGTTTGGACTCAAGTATTATTCAACTTTGTACAACTTTGGTGGGGTAGCAAGCCCAATTGGGCTATATATCCTTAATGTGAGGGTTACTGGGTATTTGTATGACAAAGAAGCTAAGAGGCAATTGGCAGAAGCAGGGCTTTCAAGGAAGGTTGGTCATGAATTGAATTGTGTTGGGGCCAGTTGCTTCAAATTGTCTTTTGCTATTATCACTGCAGCAACCATTTTTGGTGCAATTATTTCTGTCATTTTAGTGGCTAGGACAATTAAGTTCTATAAAGGTGACATATATAAGAGGTACCGGGAAGAGGCCGAAGTAGCCACGGCGGAGATGACGGTGGTCCACAACGGCAGCGAGAAAGGACAAGAAGCCAAAGTTGGGATGTAA 1806 0.4402 MAIRGVGSMAADTKLLLIQLITGRWFVVFASFLIMAASGATYMFSLYSSDIKTSLGYDQTTLNLLSFFKDLGGNLGVLSGLINEITPPWVVLAMGSVLNFFGYFMIWLAVTGRIPKPHVWHMCLYICIGANSQSFANTGSLVTCVKNFPESRGVVLGILKGYVGLSGAIITQLYFAIYYNDTKALILLIAWLPAAISFAFLRTIRYMKPVRQPNELSVFYKFLYISLGLAGFLLVMIVLQKKVSFKQSEYGGSAAVVLFLLFLPLAVVFSEQFKIRQSQKLAFVVDPLPVKIVTSGEMVKQEEYANANANANANANSNSVSAPTSSSTRWWQNVFSPPVRGEDYTILQALFSIDMILLFFASTCGVGGTLTAIDNLGQIGTSLGYPKASISTFVSLVSIWNYLGRVFSGFVSEHFLTKYKFPRPLMLTLTLLLSCLGHLLIAFDVPNGLYVASVIIGFCFGAQWPLVFAIISELFGLKYYSTLYNFGGVASPIGLYILNVRVTGYLYDKEAKRQLAEAGLSRKVGHELNCVGASCFKLSFAIITAATIFGAIISVILVARTIKFYKGDIYKRYREEAEVATAEMTVVHNGSEKGQEAKVGM. 602
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07927 601 SUPERFAMILY MFS general substrate transporter 25 279 IPR036259 -
Seca8g07927 601 SUPERFAMILY MFS general substrate transporter 344 567 IPR036259 -
Seca8g07927 601 Pfam Major Facilitator Superfamily 357 557 IPR011701 GO:0022857|GO:0055085
Seca8g07927 601 CDD MFS_Mch1p_like 23 551 - -
Seca8g07927 601 PANTHER UNCHARACTERIZED NODULIN-LIKE PROTEIN 25 570 - -
Seca8g07927 601 FunFam Nodulin family protein 346 567 - -
Seca8g07927 601 Gene3D MFS general substrate transporter like domains 327 565 IPR036259 -
Seca8g07927 601 Pfam Nodulin-like 24 269 IPR010658 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07927 Seca-Chr8 176909733 176911538 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07927 8 576 Nodulin-like Gene Family AT2G39210 68.717 0.0 802
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07927 - - gmx:100808975 915.99
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07927 8 176909733 176911538 Seca8g07927 8 176909733 176911538 ECH