Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07910 ATGGCTCTTCAACTTATGAAACCACTCTCTTTCACTCTCATCACATTAGCACTCATTTCAATTACAAAACCTTTCTCTTCTTATTTCTCCATACCTTTACCTCCATCCCCTCTCTCCATTGCTGCTGCCACCATTGTCTCTGCTCTCATCCTATACTATTTCTCTTCAAAGCGCTCTACCACTCTCCCTCCAGGCCCTCTCTCTGTTCCTATATTTGGCAATTGGTTACAAGTTGGCAATGACCTCAACCACCGTCTTTTAGCATCTCTCGCACAAACCTATGGTCCTGTTTTCCTTCTCAAACTTGGTTCCAAAAACTTGGTTGTGGTCTCTGATCCTGAACTTGCCACTCAAGTCCTCCACGCACAAGGTGTGGAATTTGGTTCTCGACCAAGAAACGTTGTGTTTGATATCTTCACAGGAAATGGCCAAGACATGGTTTTCACAGTGTATGGTGATCACTGGCGAAAAATGCGCAGAATCATGACATTGCCATTTTTCACTAACAAGGTTGTCCAAAATTACAGTAACATGTGGGAAGAAGAGATGGATTTGGTAGTGAGAGATCTTAAGGTGAATGAGAAAGTGAGAAGCGAAGGGATAGTTATCAGAAGGCGTCTTCAGTTGATGCTGTACAATATCATGTACAGAATGATGTTTGATGCTAAGTTTGAGTCTCAAGAGGATCCTCTGTTCATTCAAGCCACGAGATTTAACTCTGAGAGAAGCCGTTTGGCACAGAGCTTTGAGTACAATTATGGAGATTTTATTCCATTGCTTAGACCATTCTTGAGGGGCTACCTCAACAAGTGCAAGGACTTGCAATCTAGGAGGCTTGCATTTTTCAATGAGAACTATGTTGAGAAAAGAAGGAGAAATAATGGCAGCCAATGGGGACAAGCACAAGATAAGCTGTGCAATTGA 924 0.4242 MALQLMKPLSFTLITLALISITKPFSSYFSIPLPPSPLSIAAATIVSALILYYFSSKRSTTLPPGPLSVPIFGNWLQVGNDLNHRLLASLAQTYGPVFLLKLGSKNLVVVSDPELATQVLHAQGVEFGSRPRNVVFDIFTGNGQDMVFTVYGDHWRKMRRIMTLPFFTNKVVQNYSNMWEEEMDLVVRDLKVNEKVRSEGIVIRRRLQLMLYNIMYRMMFDAKFESQEDPLFIQATRFNSERSRLAQSFEYNYGDFIPLLRPFLRGYLNKCKDLQSRRLAFFNENYVEKRRRNNGSQWGQAQDKLCN. 308
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07910 307 PRINTS E-class P450 group I signature 210 228 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07910 307 PRINTS E-class P450 group I signature 91 110 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07910 307 PRINTS E-class P450 group I signature 115 136 IPR002401 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07910 307 Gene3D Cytochrome P450 55 306 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07910 307 PANTHER TRANS-CINNAMATE 4-MONOOXYGENASE 43 295 - -
Seca8g07910 307 Pfam Cytochrome P450 63 296 IPR001128 GO:0004497|GO:0005506|GO:0016705|GO:0020037
Seca8g07910 307 SUPERFAMILY Cytochrome P450 63 296 IPR036396 GO:0004497|GO:0005506|GO:0016705|GO:0020037
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07910 Seca-Chr8 176757106 176759396 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07910 72 306 Monolignol Biosynthesis Gene Families AT2G30490 62.128 9.88e-105 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07910 K00487 - gmx:100812188 506.138