Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g07856 | ATGATAAAAAAATTTGCATCTGCCTCTGGAGTAGGAGTTTTGATAATCTTGGCTTGGTGCTTTACAAGACGGTTGTTCAATAAGAAAAACCCCACACACCAAGTAATTGAGATGTTTCTAAAAAGCCATGGTCACCTTGCAGCCAAAAGATACAGTTATTTAGAGATAAAGAAGGCTACCAATTCCTTCAAAAACAAATTGGGTCAAGGAGGATATGGTAGTGTATACAAAGGGAAGTTACATGATGGAAGTCTTGTGGCAGTAAAAGTATTAAGTGAATCCAAAGGTAATGGGGAGGAATTCATCAATGAAGTTGCTAGTATCAGTGTCACTTCTCATGTTAACATTGTTAGTTTAGTGGGATTCTGTTTGGAAGGTTCTAAAAGAGCTCTCATATATGAATACATGCCTAATGGATCACTTGAGAATTTCATATATGAAGACAAAGATCCATTAAAGCTCAATCTCTTATTGAGTTGCAAAACTATCTACAACATTGCAATTGGAGTGGCTCGAGGATTAGAGTATTTGCACAAGGGTTGCAATACTAAAATCTTGCACTTTGATATAAAACCTCACAATATATTGTTAGACGAGTATTTCTGTCCCAAAATTTCCGATTTTGGACTTGCAAAAGTATGTCCAAGAAATGAAAGTATTGTGTCCTTATTGGGTACCAGAGGAACTGCTGGATACATTGCTCCTGAATTGTTCTCCAGAAATTTTGGTGGGGTCTCCCACAAATCTGATGTATACAGCTATGGAATGATGGTTTTAGAAATGGTTGGGGGAAGAAAGAATGCCAATGTTGAAGAAGTTGAATGTTCAAGTGAAATATATTTTCCACATTGGGTTTACAAGCGTCTTGAACTCAATCAGGAGCCTGGATTGCGATCCATCAGAAATGCTATTGATAAAGAAATGGTAAGAAAAATGATTATAGTGAGCTTATGGTGCATACAAACTGACCCATCAAATAGGCCAGCAATGAGTAAAGTGGTAGATATGATGGAAGGAAGCTTGGAATCCTTGGAAATACCACCAAAACCTTATCTCTCTTCTCCTCCCAGATCTCCCCCGAGATCATCAGATTATAACACACAAACATCTCAAGCTTTTTATCCTTGA | 1128 | 0.3741 | MIKKFASASGVGVLIILAWCFTRRLFNKKNPTHQVIEMFLKSHGHLAAKRYSYLEIKKATNSFKNKLGQGGYGSVYKGKLHDGSLVAVKVLSESKGNGEEFINEVASISVTSHVNIVSLVGFCLEGSKRALIYEYMPNGSLENFIYEDKDPLKLNLLLSCKTIYNIAIGVARGLEYLHKGCNTKILHFDIKPHNILLDEYFCPKISDFGLAKVCPRNESIVSLLGTRGTAGYIAPELFSRNFGGVSHKSDVYSYGMMVLEMVGGRKNANVEEVECSSEIYFPHWVYKRLELNQEPGLRSIRNAIDKEMVRKMIIVSLWCIQTDPSNRPAMSKVVDMMEGSLESLEIPPKPYLSSPPRSPPRSSDYNTQTSQAFYP. | 376 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g07856 | 375 | Pfam | Protein kinase domain | 64 | 335 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07856 | 375 | FunFam | serine/threonine-protein kinase PBS1-like | 31 | 135 | - | - | |
Seca8g07856 | 375 | SUPERFAMILY | Protein kinase-like (PK-like) | 41 | 337 | IPR011009 | - | |
Seca8g07856 | 375 | Gene3D | Phosphorylase Kinase; domain 1 | 37 | 135 | - | - | |
Seca8g07856 | 375 | ProSitePatterns | Protein kinases ATP-binding region signature. | 67 | 89 | IPR017441 | GO:0005524 | |
Seca8g07856 | 375 | ProSiteProfiles | Protein kinase domain profile. | 61 | 352 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07856 | 375 | SMART | serkin_6 | 61 | 337 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07856 | 375 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 185 | 197 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g07856 | 375 | PANTHER | RUST RESISTANCE KINASE LR10-RELATED | 33 | 358 | IPR045874 | GO:0004672 | |
Seca8g07856 | 375 | Gene3D | Transferase(Phosphotransferase) domain 1 | 136 | 346 | - | - | |
Seca8g07856 | 375 | MobiDBLite | consensus disorder prediction | 345 | 375 | - | - | |
Seca8g07856 | 375 | MobiDBLite | consensus disorder prediction | 358 | 375 | - | - | |
Seca8g07856 | 375 | FunFam | PR5-like receptor kinase | 136 | 349 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g07856 | Seca-Chr8 | 175985138 | 175993945 | Proximal |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g07856 | 49 | 371 | Receptor kinase-like Gene Family | AT4G18250 | 58.559 | 2.81e-129 | 385 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_LRK10L-2 | Seca8g07856 | Pkinase | 1.1e-45 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g07856 | - | - | gmx:100785979 | 624.78 |