Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07841 ATGTTCCCCTTTGTTTTGCTGTTTCTTCTTCTCTGCTGCAATTCTCTTGCACCTGTGGTGAATTCCCTGAATGCTGAAGGCTATGTGCTTTTGACGCTAAAGCAATCCATCACAGACCCACAAGGGTCTATGAGTAACTGGAATTCTTCTGATGACAACCCTTGTTCCTGGAATGGGATTACTTGCAAGGACCAAACTGTTGTGTCCATTAGTATCCCAAAGAGGAAACTTTATGGCTCTCTTCCTTCTACTCTAGGATCTCTTTCCCAGCTCCGCCATGTGAACTTCAGGAACAACAAGCTCTTTGGAAGCTTGCCTGTGCAGCTCTTTCAAGCTCAGGGACTGCAAAGTTTGGTGCTTTATGGCAATTCATTCTCTGGGTCTGTTCCAAATGAGATTCAGAAACTCAGGTACCTTCAAACTCTAGATTTATCCCAGAATTTCTTCAATGGGTCATTGCCTGCTACAATTGTCCAATGCAAGAGGCTCAAAACCCTTATTCTGAGTCGAAACAATTTCACTGGCCCTTTGCCAGATGGATTTGGTCCTGGTTTGTTTTCTCTGGAAAAACTGAACCTTTCTTTCAATCAATTTAATGGTTCAATTCCTAGTGACATGGGAAATCTATCTAGCCTGCAAGGAACTGTTGATTTGTCTCATAATCATTTTAGTGGTTCCATCCCAGCCAGCCTTGGCAATCTACCTGAGAAGGTTTACATTGATCTTACTTACAACAATTTAAATGGCCCAATACCCCAAAATGGTGCTTTAATGAACAGAGGACCAACTGCTTTCATTGGCAATCCTGGTCTATGTGACCCACCTTTGAAGAATCCATGTGGTTCTGATACTCCAGCTGCTAGTTCACCTTCCTCATTTCCATTTCTTCCTGATAACTACTCACCTCAGGATGCTGGTAATGGTTCTAGGAAAAGTGAAAAAAACAAAGGGCTAAGTAAGGGTGGTGTGATTGGCATTGTTGTGGGTGATTTAGTTGGAATTTGCCTTTTAGGTTTGCTGTTCTCTTACTTTTACTCAAGGGTTTGTGGTTTTAACCAGGATCAGGATGAAAATGGTGTTAGTAAGGGAAGGAAAGGAAGGAAAGAGTGCTTGTGCTTCAGAAAGGATGAATCTGAGGCCTTATCTGATAATGTTGAGCAATATGATCTTGTCCCATTAGATAGCCAAGTGGCATTTGATTTGGATGAGCTTCTTAAGGCTTCAGCTTTTGTTCTGGGTAAGAGTGGAATAGGGATTATGTACAAAGTGGTGCTTGAAGATGGACTTGCTTTGGCAGTGAGAAGATTAGGGGAGGGAGGTTCTCAGAGGTTTAAAGAGTTCCAAACAGAAGTAGAAGCTATAGGAAAGTTAAGGCATCCAAATATTGTGAGACTGAGAGCCTATTACTGGTCTGTTGATGAGAAGCTTCTCATATATGATTATATACCCAATGGAAGCCTTGCTACAGCAATTCATGGTAAGTTTCATTAA 1491 0.4172 MFPFVLLFLLLCCNSLAPVVNSLNAEGYVLLTLKQSITDPQGSMSNWNSSDDNPCSWNGITCKDQTVVSISIPKRKLYGSLPSTLGSLSQLRHVNFRNNKLFGSLPVQLFQAQGLQSLVLYGNSFSGSVPNEIQKLRYLQTLDLSQNFFNGSLPATIVQCKRLKTLILSRNNFTGPLPDGFGPGLFSLEKLNLSFNQFNGSIPSDMGNLSSLQGTVDLSHNHFSGSIPASLGNLPEKVYIDLTYNNLNGPIPQNGALMNRGPTAFIGNPGLCDPPLKNPCGSDTPAASSPSSFPFLPDNYSPQDAGNGSRKSEKNKGLSKGGVIGIVVGDLVGICLLGLLFSYFYSRVCGFNQDQDENGVSKGRKGRKECLCFRKDESEALSDNVEQYDLVPLDSQVAFDLDELLKASAFVLGKSGIGIMYKVVLEDGLALAVRRLGEGGSQRFKEFQTEVEAIGKLRHPNIVRLRAYYWSVDEKLLIYDYIPNGSLATAIHGKFH. 497
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07841 496 ProSiteProfiles Protein kinase domain profile. 406 496 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07841 496 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 23 182 - -
Seca8g07841 496 MobiDBLite consensus disorder prediction 282 308 - -
Seca8g07841 496 Pfam Protein tyrosine and serine/threonine kinase 427 492 IPR001245 GO:0004672|GO:0006468
Seca8g07841 496 Gene3D Phosphorylase Kinase; domain 1 375 481 - -
Seca8g07841 496 FunFam Leucine-rich repeat receptor-like protein kinase 187 282 - -
Seca8g07841 496 Gene3D Ribonuclease Inhibitor 17 76 IPR032675 -
Seca8g07841 496 Gene3D Ribonuclease Inhibitor 77 283 IPR032675 -
Seca8g07841 496 MobiDBLite consensus disorder prediction 277 316 - -
Seca8g07841 496 FunFam Leucine-rich repeat receptor-like protein kinase 389 481 - -
Seca8g07841 496 SMART LRR_typ_2 185 209 IPR003591 -
Seca8g07841 496 SMART LRR_typ_2 136 160 IPR003591 -
Seca8g07841 496 SMART LRR_typ_2 88 112 IPR003591 -
Seca8g07841 496 Pfam Leucine rich repeat N-terminal domain 24 62 IPR013210 -
Seca8g07841 496 SUPERFAMILY L domain-like 25 277 - -
Seca8g07841 496 SUPERFAMILY Protein kinase-like (PK-like) 411 493 IPR011009 -
Seca8g07841 496 PANTHER LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE PXC1 160 493 IPR046959 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07841 Seca-Chr8 175844014 175845504 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07841 1 494 Receptor kinase-like Gene Family AT2G01210 68.209 0.0 683
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca8g07841 PK_Tyr_Ser-Thr 2.5e-05 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07841 - - gmx:100792873 857.055