Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07824 TCTGTTTCTAGCCCTGAAGAAAAAAAACCCACAAGTGCTCCAGTCACTACTGAAAAATTGAACGAATCCAAAGCACCACAAACAAACACTGTCTCTGCCTCAGAAACCCCTCTACCAGCTGTTGGTTCAGGTTACAACTTTTTGACAAAACAGATGAGGTATCCAAGGAGAGCTTCACTTCTGAAATTTCTTGAGAAGAGGAAAGAAAGGGTTATTGCTGGAGGACCTTACCAAATTAATAACCCCAACAACAACCCTAAGCACGAGGGTAGCAGTTCAGGAGGTGAACCTGAAGATAAGTGTTCCAAACAATTTGGCCTTAGTTTGTAG 330 0.4242 SVSSPEEKKPTSAPVTTEKLNESKAPQTNTVSASETPLPAVGSGYNFLTKQMRYPRRASLLKFLEKRKERVIAGGPYQINNPNNNPKHEGSSSGGEPEDKCSKQFGLSL. 110
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07824 109 MobiDBLite consensus disorder prediction 1 42 - -
Seca8g07824 109 MobiDBLite consensus disorder prediction 1 39 - -
Seca8g07824 109 Pfam Jas motif 56 78 IPR018467 -
Seca8g07824 109 MobiDBLite consensus disorder prediction 73 109 - -
Seca8g07824 109 MobiDBLite consensus disorder prediction 77 91 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07824 Seca-Chr8 175634633 175635144 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07824 56 93 Tify Gene Family AT1G19180 51.220 1.17e-06 43.5
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TR Others Seca8g07824 Jas_motif 2.5e-08 CL0281
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07824 K13464 - gmx:100778559 119.012