Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07817 ATGGGAATGGAGCCAGAGAATCACAAAATGAAGGCACTGAACCTGCTTCGAAACAGAATCTGCGACCCCAAATTCATATTCAAGGATTCTCCAGAAGGCAATTACAGCAAGCTGAAATTCATGATATCAAGTTCGGTGACTGAAGCATGCAACAATTCTATTCTGCTTCTCGGTCCCCGTGGCTCCGGGAAGGTTGCGGTTTTGGAGCTTGTCATTGAAGATTTGTTGCTTCAATATCCGGACTCAATTTCATTGATCAGGTTGAATGGGCTTTTACATAGTGATGATATCTCTGCATTCAAGGAAATAGCTAGGCAGTTATGCATGGAGCATCAATTGCTATTCTCAAAAGCGGCATCATTTGATGACAACTCCCAATTTATGGTAGCCGTGCTAAAGGAATGCGGATTAGCACATAAAACAGTAGTTTTTATTCTGGATGAGTTTGACCTCTTTGCTCAGGGTAAACAGCGGTTACTTTATAGCTTGCTAGATGCAATGCAATCAGTAACATCACAGGCTGTTGTACTTGGCATTAGTTGCCGGCTGGATGCAGATCAGCTATTGGAGAAAAGAGTACGATCTCGATTTTCACATAGAAAGCTGTTGTTCTTACCACCTTCAATGGAGGACTCACAAAGATTACTGGTGCATATGCTGACGTTACCAATAGATTCAAGCTTTCCACATGATTATGCTGTTGAATTTAACAGAAAGATCCAAAATATTATAGAAGACAGAAGGTTCAAAGAAATCTTCAACAAATATTTAAATTTTGATTCCTCTGTTAAACATTTGCTGAGGTTCCTATTCTGTGCAGTCTCTCATATGGATTTGCAGACTGGGCTTCTGTCCGTGGAGAACTTTGAAAGTGCATTTTCAAGTATGCAGAGGCAGCCCAAGCTAGAATGTTTAAAAAATTGCAGCATTTTAGAACTTTATATTTTGGTTTGCATGAAGAGATTGGAAGTTAAAGAGCAGATTTTATGCAACTTCAATTCTGTAATTAAAGAGTATAAAAGTATACATGATTCTTTCCAGACTTCTGATTATTATGCACGAAATGTCTGCTTGAGGGCATTCGAACACCTTATACATCGTGAATTAATATGTTTCACAGACAATAGAGGACATAGTTTGTCTGTTGAATTCCGTCCTGTAAAGCTTTTAATTTCATCTGCGGAACTACATCAGGGACTAAGAGCATATCATTCTTGCCCTGCTATCCTTCAAAAGTTAATGGATCGTGAAGGCTAA 1257 0.3898 MGMEPENHKMKALNLLRNRICDPKFIFKDSPEGNYSKLKFMISSSVTEACNNSILLLGPRGSGKVAVLELVIEDLLLQYPDSISLIRLNGLLHSDDISAFKEIARQLCMEHQLLFSKAASFDDNSQFMVAVLKECGLAHKTVVFILDEFDLFAQGKQRLLYSLLDAMQSVTSQAVVLGISCRLDADQLLEKRVRSRFSHRKLLFLPPSMEDSQRLLVHMLTLPIDSSFPHDYAVEFNRKIQNIIEDRRFKEIFNKYLNFDSSVKHLLRFLFCAVSHMDLQTGLLSVENFESAFSSMQRQPKLECLKNCSILELYILVCMKRLEVKEQILCNFNSVIKEYKSIHDSFQTSDYYARNVCLRAFEHLIHRELICFTDNRGHSLSVEFRPVKLLISSAELHQGLRAYHSCPAILQKLMDREG. 419
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07817 418 PANTHER ORIGIN RECOGNITION COMPLEX SUBUNIT 4 11 417 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Seca8g07817 418 Pfam AAA ATPase domain 36 169 IPR041664 -
Seca8g07817 418 Pfam Origin recognition complex (ORC) subunit 4 C-terminus 215 398 IPR032705 -
Seca8g07817 418 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 45 263 IPR027417 -
Seca8g07817 418 FunFam Origin of replication complex subunit 4 32 206 - -
Seca8g07817 418 PIRSF ORC4 4 418 IPR016527 GO:0000808|GO:0003677|GO:0005634|GO:0006260
Seca8g07817 418 Gene3D - 32 206 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07817 Seca-Chr8 175498942 175503996 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07817 3 415 Core DNA Replication Machinery Family AT2G01120 66.194 0.0 573
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07817 K02606 - gmx:100800582 711.064
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07817 8 175498942 175503996 Seca8g07817 8 175498942 175503996 ECH