Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07756 ATGAAACTACATGAACCCTGTTTATTTATTTGTCATATTTTTTGCGAAGAAGAACATCCACTGTTGTTGTTGGATACAGTTGCTCGAATGGCTACGTTTTCATTTGGGGCACACTTGTCGACGTTCCAACATTTGCAGAACTCTAGACTTTCACTTCATGGCCTTTCATCCGTTGAATCTTCACCATCATCTCGACCCTTCTTTGGCCCCTCTTCTTGTAGAATCAGATTCAGAGGTCCTACTCCCAGGTTCCTCCGTAATATTGTATTGGCACGTGCTGAAGACAAGGCCAGAGGTCCTTCTCCTTCTTCTTCTTCGTTTCAGCCACCACAAAGCTCCCAGCAAGAGTTCCAGAACTTGACGTCAGAACCTGGAACTTGTGATCCCCTATGTTCACTTGATGAAGCAAGCTCACAAGATTTTGAAGACAACTACCAGCCCAAGACTGATTTGCTCAAAGCTATTGCAGTATTTGCAGCAGCTGGAACTGGGGCAGTGGCAATTAACCACTCTTGGGTGGCCGCAAATCAGGATCTTGCTATGGCATTGCTATTTGTAATAGGATATGCAGGCATCATATTTGAAGAATCTCTAGCCTTCAATAAAAGTGGAGTAGGACTATTGATGGCTGTAAGCTTGTGGGTGATACGGAGTATTGGGGCTCCATCAACTGATATAGTTGTTTCAGAGCTAACACATGCATCTGCTGAAGTCAGTGAAATAGTGTTTTTCCTCCTTGGTGCAATGACCATTGTTGAGATAGTTGACGCTCATCAAGGATTTAAGCTAGTTACTGACAATATAACAACCCGGAACCCACGCCTTCTCCTCTGGGTGGTTGGATTTGTTACATTTTTTCTCAGTGCAGTTCTAGACAATCTGACATCCACTATAGTCATGGTTTCTCTGTTGCGGAAATTAGTACCTCCATCAGAGTATCGGAAGATTCTTGGAGCTGTTGTTGTAATAGCAGCAAATGCTGGTGGGGCATGGACTCCTATTGGTGATGTTACCACTACAATGCTGTGGATACATGGTCAAATATCTACACTGCCAACAATGAAGGGTTTATTTATACCTTCAGCCCTTTCTCTAGCTGTTCCACTGGCTCTAATGTCCCTGACTAGTGAAGTTAATGGAAAGGGACAAGATTCTCCCAATGTCTTAGCATCTGAACAGATGGCTCCTCGAGGACAGCTTGTTTTCTCAGTGGGTTTAGGCGCTCTGGTTTTTGTCCCCGTATTCAAGGCTCTCACAGGTTTGCCTCCCTACATGGGGATGCTGCTTGGACTTGGTGTGCTTTGGATCCTCACTGATGCTATCCATTACGGTGAATCTGAAAGGCAGAAGTTAAAAGTGCCACAGGCTCTGTCAAGGATAGACACTCAAGGAGCACTATTCTTCCTCGGAATTCTATTGTCCGTTAGCAGCCTGGAGGCAGCAGGGATTCTTCGTGAAATAGCAAATTACCTTGATTCTCATGTCCCAAGTAGTGAACTGATTGCAAGTGCTATTGGGGTCATATCTGCAGTGATAGACAATGTTCCATTGGTTGCTGCAACAATGGGAATGTATGATGTCACTTCTTTTCCTCAAGATTCTGAGTTCTGGCAATTGGTTGCATTTTGTGCTGGTACTGGTGGATCCATGTTGATTATTGGCTCAGCTGCTGGAGTTGCATTCATGGGGATGGAAAAGGTTGACTTCTTTTGGTACTTCCGTAAGATTAGTGGCTTTGCTTTTGCAGGCTATGCTGCTGGTATTGCTACCTATTTAGCGGTTCATAACCTTAACATCTCCCTACCAACAACTCTAGCAGAGATTCCTTTCCTTTCTGGCTCATAA 1845 0.4428 MKLHEPCLFICHIFCEEEHPLLLLDTVARMATFSFGAHLSTFQHLQNSRLSLHGLSSVESSPSSRPFFGPSSCRIRFRGPTPRFLRNIVLARAEDKARGPSPSSSSFQPPQSSQQEFQNLTSEPGTCDPLCSLDEASSQDFEDNYQPKTDLLKAIAVFAAAGTGAVAINHSWVAANQDLAMALLFVIGYAGIIFEESLAFNKSGVGLLMAVSLWVIRSIGAPSTDIVVSELTHASAEVSEIVFFLLGAMTIVEIVDAHQGFKLVTDNITTRNPRLLLWVVGFVTFFLSAVLDNLTSTIVMVSLLRKLVPPSEYRKILGAVVVIAANAGGAWTPIGDVTTTMLWIHGQISTLPTMKGLFIPSALSLAVPLALMSLTSEVNGKGQDSPNVLASEQMAPRGQLVFSVGLGALVFVPVFKALTGLPPYMGMLLGLGVLWILTDAIHYGESERQKLKVPQALSRIDTQGALFFLGILLSVSSLEAAGILREIANYLDSHVPSSELIASAIGVISAVIDNVPLVAATMGMYDVTSFPQDSEFWQLVAFCAGTGGSMLIIGSAAGVAFMGMEKVDFFWYFRKISGFAFAGYAAGIATYLAVHNLNISLPTTLAEIPFLSGS. 615
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07756 614 PANTHER SODIUM/PROTON ANTIPORTER 1-RELATED 88 614 IPR045016 GO:0006814|GO:0015297
Seca8g07756 614 Pfam Citrate transporter 190 545 IPR004680 GO:0016020|GO:0055085
Seca8g07756 614 NCBIfam sodium:proton antiporter NhaD 206 436 - -
Seca8g07756 614 MobiDBLite consensus disorder prediction 99 122 - -
Seca8g07756 614 MobiDBLite consensus disorder prediction 95 122 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07756 Seca-Chr8 174831571 174837591 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07756 30 614 Antiporters AT3G19490 77.094 0.0 838
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07756 - - gmx:100779521 911.753
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07756 8 174831571 174837591 Seca8g07756 8 174831571 174837591 ECH