Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07752 ATGAGCCTTAACTCCAAGAATCTCCATTTTTGGTGGAAAGTTTCATCCTTTCTTCTCCTAGTTCTTCAATCTGTTGCTCTTAACTCTGATGGGATTCTCTTGCTTAAATTCAAATACTCCATCCTCAGTGACCCATTATCAGTCTTAGAGAGCTGGAACTATGATGATGCAACTCCATGTTCATGGCATGGAGTTACATGCACTGAAACTGGATCCCCTGGTACTGGTGGTACCCCTGATTTGTTCAGAGTAATAAGCTTGGTTCTTCCAAACAACCAACTTCTAGGTTCCATTGCTGAAGAATTAGGCATGATCCAATACCTTCGCCATCTTGATCTCTCCAACAATTTCCTTAACGGCTCTCTACCAAACTCTATCTTCAACTCTTCTCATCTTCAAGTTCTTTCTCTCTCAAACAATGTCATCTCAGGTCAGTTACCTGAGTTGATTGGTAAATTGACAAGCCTTCAATTTCTCAACCTTTCTGACAATGCCTTTGCTGGGTTGATCCCAGAAAATCTCACTGCTTTACAAAATCTAACAGTTGTTTCTCTCAAGAGTAACTATTTTTCTGGTGAAGTCCCAACTGGTTTCAACTCAGTGGAGATTTTGGATCTGTCTTCCAATTTGCTCAATGGTTCTCTGCCAAATCACTTTGGTGGTGAAAGCTTGCGCTACTTGAACCTATCTTACAACAAGATCTCAGGAACAATACCACCAGCATTTGCAAAACAGATTCCTGGAAACTCTACAATTGACCTCTCATTCAACAATCTCACAGGACCAATACCAGAGTCTCTGGCTCTGCTCAACCAAAAAACAGAGTTGCTATCTGGGAATGCTGATCTATGTGGGAAGCCTTTGAAGATTCTTTGCTCTATTCCCTCTACTATTTCCACTCCTCCACCCAACATCACCAACACATCTTCACCAGCAATTGCAGCCATACCAAAAACAATTGACACAAATCCAACAACAAACACAACAGAAAACCCCTCTCAGAATGTGTCACAGAATGGCCTAAAACCTGCTACAATAGCAGCCATTGTGGTAGGAGACTTAGCTGGCATGGCCGTTTTAGCCTTAATCATTCTCTTTGTCTACCAACAAAGAAAGAGAAGAGATCCAAAACCAACCACAACCACAACCAACTCAGAAAAGAAACAGCAAATTGTTGCAAGACAAGACCCAGAGATGAGAACAACCTCACTTCCATTTTCCTGCTTAAAAATCAAAGAAGAAGAGACTTCAGAAGCAACAAGCTCTGACAGTGACCATGACAACAACACCAACATGGACATCACAGCACAAAACGAGAACCTTCCAAAAGAAGGCACTCTTGTAACGGTCGACGGAGAAACGAAACTGGAACTGGACACTCTGCTGAAAGCCTCAGCATATATTCTGGGAACTAGCCGTGTGAGCATAGTGTACAAAGCAGTGCTTCATGATGGAAGAGTCTTTGCTGTTAGAAGAATTGGTGAGTGTGGCATTGAGAAGATGAAGGACTTCGAGAACCAAGTTCGTGCAATTGCAAAACTTCGCCACCCAAATTTGATCAAAGTTCGTGGGTTCTGTTGGGGTGAAGATGAAAAGCTTGTAATCTCTGATTACATTCCCAATGGCAGCATCGCCAGCATTGGTTTAAGGAAAGGAGGATCATCCCCTGTTAATTTGTCCTTAGAGGTGCGGTTGAAGATAGCAAAAGGGGTTGCAAGAGGCTTGGCTTTCATTCATGAGAAGAAACACGTGCATGGCAACATTAAACCCAGCAATATTCTGTTAAACTCAGAAATGGAACCCATCATAGGTGATTTTGGGTTGGACCGGCTACTCTTGAATGATAGTATCAACCAGAGAGCAAACGGTTCAGCGAGGCAATTAATGGTGAACCAAAGAACCCAACAAGAACCTCCAATTGGTTCTGTTTCTAGCCCCTATACAACAATGGGACCATCATCTAGTGGGGGCCAGGGTCAAGTACCATATCAAGCACCAGAGTCACTTCAAAACATCAAACCAAGCCCCAAATGGGACGTCTATTCGTTTGGCATTGTGTTGTTGGAGCTTCTCAGTGGGAGGGTTTTCTCAGACCGGGAGTTGGACCAGTGGTCTGCAGTATCCGGTTCGGTTGAAGAGGAAAAAAACCGGATCTTGAGGTTAGCTGACGTGGCCATCAAGCCTGAGATAAAAAGCAGAGAAAATGTGATATTGGGATGCTTCAAGTTGGGGCTTAGCTGTGCTTCTCTTGTCCCACAAAAGAGACCGTCCATGAAAGAGGCTCTACAAATCTTAGACAAGATCCCTGCTTCTGCCATTAATTAA 2325 0.4327 MSLNSKNLHFWWKVSSFLLLVLQSVALNSDGILLLKFKYSILSDPLSVLESWNYDDATPCSWHGVTCTETGSPGTGGTPDLFRVISLVLPNNQLLGSIAEELGMIQYLRHLDLSNNFLNGSLPNSIFNSSHLQVLSLSNNVISGQLPELIGKLTSLQFLNLSDNAFAGLIPENLTALQNLTVVSLKSNYFSGEVPTGFNSVEILDLSSNLLNGSLPNHFGGESLRYLNLSYNKISGTIPPAFAKQIPGNSTIDLSFNNLTGPIPESLALLNQKTELLSGNADLCGKPLKILCSIPSTISTPPPNITNTSSPAIAAIPKTIDTNPTTNTTENPSQNVSQNGLKPATIAAIVVGDLAGMAVLALIILFVYQQRKRRDPKPTTTTTNSEKKQQIVARQDPEMRTTSLPFSCLKIKEEETSEATSSDSDHDNNTNMDITAQNENLPKEGTLVTVDGETKLELDTLLKASAYILGTSRVSIVYKAVLHDGRVFAVRRIGECGIEKMKDFENQVRAIAKLRHPNLIKVRGFCWGEDEKLVISDYIPNGSIASIGLRKGGSSPVNLSLEVRLKIAKGVARGLAFIHEKKHVHGNIKPSNILLNSEMEPIIGDFGLDRLLLNDSINQRANGSARQLMVNQRTQQEPPIGSVSSPYTTMGPSSSGGQGQVPYQAPESLQNIKPSPKWDVYSFGIVLLELLSGRVFSDRELDQWSAVSGSVEEEKNRILRLADVAIKPEIKSRENVILGCFKLGLSCASLVPQKRPSMKEALQILDKIPASAIN. 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07752 774 FunFam Leucine-rich repeat receptor-like protein kinase 201 294 - -
Seca8g07752 774 CDD STKc_IRAK 469 768 - -
Seca8g07752 774 MobiDBLite consensus disorder prediction 373 397 - -
Seca8g07752 774 Pfam Leucine rich repeat N-terminal domain 28 67 IPR013210 -
Seca8g07752 774 SUPERFAMILY L domain-like 33 290 - -
Seca8g07752 774 Pfam Leucine Rich Repeat 223 243 IPR001611 GO:0005515
Seca8g07752 774 CDD TM_EGFR-like 345 374 - -
Seca8g07752 774 Gene3D Transferase(Phosphotransferase) domain 1 540 773 - -
Seca8g07752 774 Gene3D Phosphorylase Kinase; domain 1 431 538 - -
Seca8g07752 774 ProSiteProfiles Protein kinase domain profile. 463 768 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07752 774 FunFam LRR receptor-like serine/threonine-protein kinase ERECTA 27 200 - -
Seca8g07752 774 Gene3D Ribonuclease Inhibitor 199 294 IPR032675 -
Seca8g07752 774 Gene3D Ribonuclease Inhibitor 27 198 IPR032675 -
Seca8g07752 774 Coils Coil 773 774 - -
Seca8g07752 774 SUPERFAMILY Protein kinase-like (PK-like) 468 767 IPR011009 -
Seca8g07752 774 MobiDBLite consensus disorder prediction 382 397 - -
Seca8g07752 774 Pfam Leucine rich repeat 107 165 IPR001611 GO:0005515
Seca8g07752 774 Pfam Protein kinase domain 469 763 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07752 774 PANTHER OS05G0588300 PROTEIN 176 769 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07752 Seca-Chr8 174793810 174797413 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07752 17 773 Receptor kinase-like Gene Family AT4G37250 49.935 0.0 702
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_LRR-III Seca8g07752 Pkinase 4.8e-30 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07752 - - gmx:100820334 1082.4