Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07745 ATGAAAACCAGCTCCATTCACCTACCGCACCAGTGGGCCCCACCACTCCTCTTGTTATGGTTTGGGTTTTGGCACCTTTATATAAACGCATCTTCTGAACCCAACCCCACTCACCAAGGCCACTCATATTGTCCTGTTTGTCTCTCCATTCCTTTCTCAAATTCTCTTTCACCTTTTGCTTCTGAAAAAGCATTCATGGGTAGCCTTGAAGCGGAAAGAACCACTGTTGGATGGGCAGCAAGAGACCCTTCAGGGATCCTCTCTCCATACACCTACAATCTGAGATATACTCCTCTCTATCTGGTTCTGACTCTGAAAACATGCAGAAACACAGGCCCAGATGATGTTTACCTCAAAGTTCACTACTGTGGAATTTGCCATTCTGATCTCCACCAAATTAAAAATGATCTTGGCATGTCCAATTATCCCATGGTCCCAGGGCATGAAGTTGTTGGCGAAGTACTCGAGGTGGGCTCTAATGTTACCAAGTTCAGAGTGGGGGAGATTGTGGGAGCTGGACTCCTTGTTGGGTGCTGCAAAAACTGCAACGCATGCCAATCTGATATTGAGCAATACTGTAGCAAGAAGATCTGGTCTTACAATGATGTTTATACAGATGGAAAACCCACACAGGGTGGCTTTGCTGAAACCATGATCGTTGAGCAAAAGTTTGTTGTGAAAATACCAGAGGGTTTGGCGCCAGAGCAAGTTGCACCATTGTTGTGTGCGGGTGTGACTGTGTATAGTCCACTCTCTCACTTTGGGCTGAAACAGAGCGGGCTTAGAGGTGGAATTTTGGGGCTTGGAGGAGTGGGACACATGGGGGTGAAGATTGCAAAGGCATTTGGTCACCATGTGACTGTGATAAGCTCTTCTGATAGGAAGAAGCAAGAGGCTCTTGAGCACCTTGGAGCTGATGCATATCTGGTTAGCTCAGATACCACTAGCATGCAGGAAGCTGCTGAATCACTTGATTTTATCATTGACACTGTGCCTGTTGGTCACCCTCTTGAGCCTTATCTTTCCTTGCTCAAACTTGATGGCAAGTTGATCTTGATGGGTGTGATAAACACTCCTCTTCAATTTGTTTCCCCCATGGTCATGCTAGGTAGGAAGTCAATCACTGGAAGCTTCATCGGGAGCATAAAGGAGACAGAGGAGATGCTAGAGTTCTGGAAAGAGAAGGGTCTGGATTCCATGATTGAAATTGTAACTATGGATTACGTTAACAAAGCTTTGGAAAGATTGGAGAAGAATGATGTGAGATATAGGTTTGTTGTGGATGTCAAAGGCAGCAAACTTGATCAGTGA 1311 0.4554 MKTSSIHLPHQWAPPLLLLWFGFWHLYINASSEPNPTHQGHSYCPVCLSIPFSNSLSPFASEKAFMGSLEAERTTVGWAARDPSGILSPYTYNLRYTPLYLVLTLKTCRNTGPDDVYLKVHYCGICHSDLHQIKNDLGMSNYPMVPGHEVVGEVLEVGSNVTKFRVGEIVGAGLLVGCCKNCNACQSDIEQYCSKKIWSYNDVYTDGKPTQGGFAETMIVEQKFVVKIPEGLAPEQVAPLLCAGVTVYSPLSHFGLKQSGLRGGILGLGGVGHMGVKIAKAFGHHVTVISSSDRKKQEALEHLGADAYLVSSDTTSMQEAAESLDFIIDTVPVGHPLEPYLSLLKLDGKLILMGVINTPLQFVSPMVMLGRKSITGSFIGSIKETEEMLEFWKEKGLDSMIEIVTMDYVNKALERLEKNDVRYRFVVDVKGSKLDQ. 437
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07745 436 Gene3D - 108 429 - -
Seca8g07745 436 Pfam Zinc-binding dehydrogenase 270 391 IPR013149 -
Seca8g07745 436 Pfam Alcohol dehydrogenase GroES-like domain 113 228 IPR013154 -
Seca8g07745 436 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 233 397 IPR036291 -
Seca8g07745 436 FunFam Cinnamyl alcohol dehydrogenase 243 399 - -
Seca8g07745 436 CDD CAD1 76 428 IPR047109 GO:0016616
Seca8g07745 436 SMART PKS_ER_names_mod 97 427 IPR020843 GO:0016491
Seca8g07745 436 Gene3D - 243 399 - -
Seca8g07745 436 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 147 161 IPR002328 GO:0008270|GO:0016491
Seca8g07745 436 SUPERFAMILY GroES-like 109 260 IPR011032 -
Seca8g07745 436 PANTHER ALDEHYDE REDUCTASE 71 431 IPR047109 GO:0016616
Seca8g07745 436 FunFam Putative cinnamyl alcohol dehydrogenase 6 400 429 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07745 Seca-Chr8 174742351 174744943 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07745 66 434 Monolignol Biosynthesis Gene Families AT3G19450 75.135 0.0 516
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07745 K00083 - gmx:100777558 625.935