Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07706 ATGGGACACTCTAACGTTTGGAACTCTCACCCCAAGAACTACGGTCCTGGTTCTCGCGCTTGGTATGCCATTGCTTCAATTCTCGTCTTAACTTCTTGCAGCCGTGTGTGTGGGAACCCGCATGGATTGATCAGGAAGTATGGCCTTATGTGCTGCAGGCAATGCTTCCGTAGCAATGCCAAGGAGATTGGCTTCATTAAGGTCAATATTTGGATCTGCTATTCTCAATTTCAATCTTTTAAATAA 246 0.4512 MGHSNVWNSHPKNYGPGSRAWYAIASILVLTSCSRVCGNPHGLIRKYGLMCCRQCFRSNAKEIGFIKVNIWICYSQFQSFK. 82
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07706 81 Pfam Ribosomal protein S14p/S29e 35 67 IPR001209 GO:0003735|GO:0005840|GO:0006412
Seca8g07706 81 FunFam 40S ribosomal protein S29 29 69 - -
Seca8g07706 81 Gene3D 30s Ribosomal Protein S14; Chain N 1 69 IPR043140 -
Seca8g07706 81 PANTHER 40S RIBOSOMAL PROTEIN S29 1 68 IPR039744 GO:0003735|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07706 Seca-Chr8 174359644 174360486 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07706 1 67 Cytoplasmic Ribosomal Protein Gene Family AT4G33865 73.134 3.87e-28 94.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07706 K02980 - pop:7497336 114.005