Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07704 ATGAGTTGCAACGGTTGCCGTGTCCTCAGAAAGGGTTGCAGTGAGGATTGCATGCTACGACATTGCCTTTTGTGGATAGAGAACCCACAAGCACAAGCTAACGCCACCCTCTTTGTTGCCAAGTTCTTCGGCCGTGCCACCCTCATGTCTTTCCTTTCCTCTGTTCCTACCAACCAAAGATCTGCTTTGTTTCAGTCACTTTTGTATGAAGCAGTGGGGCGTACTATAAATCCAGTGAATGGAGCAGTGGGGTTGTTGTGGACAGGGAACTGGCACCTCTGCCAATTGGGTGTGGAGAAAGTTCTCCGAGGTGATGGTGGTTCCTTGACCCCACTCCCTCACTTCTATGAGACTGATCTTCAGGGCTTTGAATCTCTTGCCCCTTCTTGTCATAGTCATCATCATCAGCAGCAGAAAGTAATGGGTTCAGGATCAAGGATGATACTCAAGAATCATGAATTAGAAGCACAATCAGAGAGAGTGGTGGTTGGAAGTGGAAGGTATCATCACCACCAACACCAAGCAAAGAAACAACGTGCGGGGACACCCTCTGAGGAATCGGAGACATCATCGCTGGGAAGCAGAGCAGAGGATTCTGTTTCTGAGAATGAAAGGAAGCTCCTTCCACTATTCTTCTGA 639 0.4836 MSCNGCRVLRKGCSEDCMLRHCLLWIENPQAQANATLFVAKFFGRATLMSFLSSVPTNQRSALFQSLLYEAVGRTINPVNGAVGLLWTGNWHLCQLGVEKVLRGDGGSLTPLPHFYETDLQGFESLAPSCHSHHHQQQKVMGSGSRMILKNHELEAQSERVVVGSGRYHHHQHQAKKQRAGTPSEESETSSLGSRAEDSVSENERKLLPLFF. 213
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07704 212 PANTHER LOB DOMAIN-CONTAINING PROTEIN 38 1 208 - -
Seca8g07704 212 MobiDBLite consensus disorder prediction 164 212 - -
Seca8g07704 212 Pfam Lateral organ boundaries (LOB) domain 2 99 IPR004883 -
Seca8g07704 212 ProSiteProfiles LOB domain profile. 1 107 IPR004883 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07704 Seca-Chr8 174340306 174341564 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07704 1 211 AS2 family AT4G37540 47.967 2.51e-60 187
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF LOB Seca8g07704 LOB 5.2e-26 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07704 - - lja:Lj5g3v2099760.1 267.7