Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07673 ATGGAGGAGCCCCAAGTGCCTCTCTTGCTCGACCTGCAATTATTCGAACCCAGATTCGTCTTCGAACCCAAAACGGTTCAGAGAATGGAGCTTTGGGTCATGGCAAAACTCAAATGGAGACTCCGCTCTGTCACTCCCTTCGATTACCTCGATTCTTTCTTTGCCAAGCTCCCTTGTTCTTCCTCTTCTTCTCCTTCCGAATCATTGGACCTGTTCTTCTCCACAGCCTCCGAACTCATTCTCAACACAACCCGTGTGATTGACTTCTTGGAGTTTGCGCCGTCCACGGTGGCAGCAGCCGCCGTGCTCTGCTCAGCTGGCTACGGCCACGACATTGTTTCCACCAACGCCCAATTGCCGCTTTGTTTTCACGACAGAGTAAACCAAGAAATGGTGAGATGCTGTCACCAACTAATGGAGGAGTATGTGGTGGACACGTGTCACTTATCTCGCCATAAAGAAAGTAGAGCCGAGCCGGCGCCGCCTTCTAGCCCCATCGGCGTGCTCGACGCGGCTACTTGTGCCAGCTGTGACACCCCTTCCGACAGGAATTCCACCGGCGAACAAGCCGACCCGCCAAACAAGCGCCTGCGATCGGATGTACCCTAA 609 0.5386 MEEPQVPLLLDLQLFEPRFVFEPKTVQRMELWVMAKLKWRLRSVTPFDYLDSFFAKLPCSSSSSPSESLDLFFSTASELILNTTRVIDFLEFAPSTVAAAAVLCSAGYGHDIVSTNAQLPLCFHDRVNQEMVRCCHQLMEEYVVDTCHLSRHKESRAEPAPPSSPIGVLDAATCASCDTPSDRNSTGEQADPPNKRLRSDVP. 203
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07673 202 SMART Cyclin_C_2 44 177 IPR004367 -
Seca8g07673 202 SUPERFAMILY Cyclin-like 1 41 IPR036915 -
Seca8g07673 202 PANTHER CYCLINS 19 144 IPR039361 -
Seca8g07673 202 Pfam Cyclin, C-terminal domain 44 151 IPR004367 -
Seca8g07673 202 MobiDBLite consensus disorder prediction 174 202 - -
Seca8g07673 202 CDD CYCLIN_AtCycD-like_rpt2 44 139 - -
Seca8g07673 202 Gene3D - 23 157 - -
Seca8g07673 202 FunFam D6-type cyclin 34 137 - -
Seca8g07673 202 MobiDBLite consensus disorder prediction 177 192 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07673 Seca-Chr8 174029346 174032229 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07673 1 176 Core Cell Cycle Gene Families AT2G22490 41.758 2.24e-27 104
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07673 K18810 - gmx:100798996 273.863
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07673 8 174029346 174032229 Seca8g07673 8 174029346 174032229 ECH