Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07670 ATGTCGAACATGAGCGATGAGAGGGTTATGAGGCGACACATTGGTAGGAAGGGAAGCGGCGCAAGAACATGGCTGGTGTTGGGCGGCGCCGGGAAGAAACAGGTGGTGGACGCCGCAAGACACCTCATAATGCAGCGGACAGGACTTACCGCTCGGGACCTTCGGATCCTTGACCCCTTGCTGTCTTACCCTTCCACCATTGCAGGGCGTGACAGAGCCATCGTCATCAGCTTGGAACACATCAAGGCTATCATCACTGCCCAAGAGGTTCTCTTGCTCAATTCCAGGGACCCCTTTGTTACCCCTTTTGTTGACGACCTTCATGCACGGATTCTTCGTCACCACAGTGCCACTCAGACTCAAACTCAGAGTCAAGATCGGAAGAAGAAGGACAAAGATGAAACAAAGCAAGATAGCAGCATCAAGATTTTCCCTTTTGAGTTTGTAGCACTCGAGGCATGCCTTGAGGAAGCTTGTAGTGTCTTAGAAAATGATGCAAAGATATTGGAGCAGGAGGCTCATAATGCCTTAGATAATCTGACTTCAAAGATTAGTACTCTCAATTTGGAATGCGTTCGCCATGTTAAGAGCCGCTTAGCTGCCTTAACCGCTCGTGCTCAAAGGGTAAGGGATGAATTAGAGAACTTGCTGGATGATGATGAAGGTATGGCTGAGCTCTATCTCACAGAAAAGTTAGTTCAACATCACCTTGAAAGTTGTTCTGCCTCATCCATGAATGACTGGGATGACATGGAGAATCGAGTTCTTCAACCAGATATGAATCACAGGCATGTTGTGATTCCTCCTGAAATATCATTGGAACGTGGTGGAGATTCTACAAGGGATGATGAAGAAGATCATCAAAATGCTGCTGATTACTCCAGCAACCAAGTATTAGCTAGTGGATCTAATAGAGTTGGCAGCGAAATCCATGACCATGAGACCCAAGCAGGAACTACCCACAGTGCTTTAACCAAGAACAATAATGTGGAGGAGGTTGAGATGCTTTTGGGAGCATACTTTGTACAAATCGGTGGCACACTCAACAAACTATCAACGCTGAAGGAGTACGTGGATGATACAGAGGATTACATAAACATTACCCTGGATGACAAACAGAACCAAATCTTGCAAACGGGAGTGAAGGTGGGCACAGCAAGTGTGCTTGTGAATGCGTTTGTTGTGGTGACGGGTGTTTTTGGAATGAATATTCACATTGAGCTATTTGATAGTGGGATGCCACAGTTCCTGGGGGTTATTTTCGGATGCACCGCTTCTTGCATATTCTTGTACATCGTTGCCATGATCTGGTACAACTACAAGCGCTTGCTCGAATAG 1338 0.4641 MSNMSDERVMRRHIGRKGSGARTWLVLGGAGKKQVVDAARHLIMQRTGLTARDLRILDPLLSYPSTIAGRDRAIVISLEHIKAIITAQEVLLLNSRDPFVTPFVDDLHARILRHHSATQTQTQSQDRKKKDKDETKQDSSIKIFPFEFVALEACLEEACSVLENDAKILEQEAHNALDNLTSKISTLNLECVRHVKSRLAALTARAQRVRDELENLLDDDEGMAELYLTEKLVQHHLESCSASSMNDWDDMENRVLQPDMNHRHVVIPPEISLERGGDSTRDDEEDHQNAADYSSNQVLASGSNRVGSEIHDHETQAGTTHSALTKNNNVEEVEMLLGAYFVQIGGTLNKLSTLKEYVDDTEDYINITLDDKQNQILQTGVKVGTASVLVNAFVVVTGVFGMNIHIELFDSGMPQFLGVIFGCTASCIFLYIVAMIWYNYKRLLE. 446
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07670 445 Gene3D - 8 95 - -
Seca8g07670 445 FunFam Magnesium transporter MRS2-1 12 95 - -
Seca8g07670 445 CDD Mrs2_Mfm1p-like 24 443 IPR039204 -
Seca8g07670 445 Coils Coil 152 190 - -
Seca8g07670 445 Gene3D Magnesium transport protein CorA, transmembrane region 101 376 - -
Seca8g07670 445 MobiDBLite consensus disorder prediction 271 298 - -
Seca8g07670 445 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 13 444 IPR039204 -
Seca8g07670 445 Coils Coil 192 219 - -
Seca8g07670 445 MobiDBLite consensus disorder prediction 275 290 - -
Seca8g07670 445 MobiDBLite consensus disorder prediction 115 136 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07670 Seca-Chr8 174005729 174007950 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07670 23 445 MRS2 Gene Family AT3G19640 53.422 1.81e-147 427
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07670 - - ccaj:109817554 482.641