Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07650 ATGGCTACTGTTTGTTCTAGGCTTCTGCTTTCCTTTCTTTGTTGGCTTTCTGTAATAATAATATCTCAAGCCAGCACCGAGCCAATTTACAACTTAGGCAACTACACAGCCAATAGCACCTATGACAACAACCTCAACTCTCTTTTATCCAATTTCTCTTCTCACACAGAAATTAATTATGGATTTTACAATTTCTCATACGGCCAAAACACAAACAGAGTAAACGCCATTGGGTTGTGTAGAGGAGATCTTATCCCAAGTGAGTGTCGTAGCTGCCTCACCAATTACTCAAGAGTCGAAATGGAACAGCTTTGTCCAAACCAGAAAGAGGCAATTGTGTGGTATGACAAATGCATGTTGCGCTATTCGAACCGCTCAATATTTAGCACCAAGGAAACTTATCCTACAATTTATATGTGGAACTTAAGCAATGCAACGGAGGTGGATCAGTTCAAACAAGTGCTCAACAACTTGATGAGGAATCTAAAAGGCATAGCAGCATCGGGTGATTCTCGTCGTAAGTATGCTACAGATAATGCAACTACTGCAAATTTTCAAACCATATATGGTCTTGTGCAGTGCACGCCTGATTTGTCAGGGCAAGATTGTAATGACTGTTTGGATGAAGCTATCTCACATATCCCAAAATGTTGTGATGGAAAGATAGGTGGTAGAGTTCTTATGCCTAGTTGTTATATTAGATATGAATCTGCTCGTTTCTACGAACCTGCGATAGTATTAGACCAAGATAATCATGTACCACCTCCACCATCTCCTCTGTCCACCAATAACACTTCCTCCAAAGAGGATTCTGGTAACTCATCAAAAACTACCATCATTGCCATAGTTGTGCCTACTGTTGCTGTTGTTGTTGTTCTGCTCATTTTTGTTGGCATGTATTCAAGGAGCAGGAAGGCCAGGAAAGTCGTAGTTTCAGAAGAAGAAGATGGTGATGACAATGATGAAATTGAAGTTGTTGAGTCATTGCAATTCAACCTTGACAAAATACGAGATGCTACAAGTAATTTCTCTGATTCTAATAAACTTGGACAAGGTGGATTTGGAGCTGTTTACTGGGGTAAGCTTTCTAATGGACAAGTGATTGCTGTCAAAAGATTGTCAAGAAATTCTGGACAAGGAGATGTTGAATTTAAGAATGAAGTGCTTTTAGTGGCTAAGCTTCAACACCGAAATTTGGTGAAACTACTTGGTTTCTGTTTAGAAGGAAGAGAAAGGCTACTTGTCTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTCATATTTGATCCAACAAAGAAAGAACAATTAGATTGGCAAAGACGCTACAAAATCATTGGAGGTATTGCTCGAGGTCTTCTATACCTTCATGAGGATTCTAGACTTCGCATTATACATCGTGATCTTAAAGCAAGCAACATTCTCTTAGATGATGAGATGAATCCTAAGATATCAGATTTTGGCATGGCAAGATTATTTGTTATGGATGAAACTCAGGGGAATACAAGTAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATGCATGGGCAATTTTCAGTAAAATCAGATGTCTTTAGTTTTGGTGTCCTAGTTCTTGAGATTGTAAGTGGACAAAAAAATAGTGGCTTTCATCATGGGGAGAATGTGGAGGATCTACTAAGCTTTGCATGGAGAAATTGGAGAGATGGGACACCTACAAACATTATAGATCCATCATTAAACAACAGTTCACGAAATGAGATTATGAGATGCATCCATATTGGTTTACTCTGTGTTCAAGAAAATTTAGCGGACAGACCAACCATGGCTACCGTTGCACTCATGCTGAATAGTTTTTCTCTCACTCTCCCAGTACCTTTAGAACCTGCATTTTATATGGACAGTAAAACTAGAAGTCTTACAAACATGCAATCATGGGAAGATAATTCTGAGGTAATAAGGTCAAGTGAGTCCATGAGAATTATATCACCTCGAGAATAG 1992 0.387 MATVCSRLLLSFLCWLSVIIISQASTEPIYNLGNYTANSTYDNNLNSLLSNFSSHTEINYGFYNFSYGQNTNRVNAIGLCRGDLIPSECRSCLTNYSRVEMEQLCPNQKEAIVWYDKCMLRYSNRSIFSTKETYPTIYMWNLSNATEVDQFKQVLNNLMRNLKGIAASGDSRRKYATDNATTANFQTIYGLVQCTPDLSGQDCNDCLDEAISHIPKCCDGKIGGRVLMPSCYIRYESARFYEPAIVLDQDNHVPPPPSPLSTNNTSSKEDSGNSSKTTIIAIVVPTVAVVVVLLIFVGMYSRSRKARKVVVSEEEDGDDNDEIEVVESLQFNLDKIRDATSNFSDSNKLGQGGFGAVYWGKLSNGQVIAVKRLSRNSGQGDVEFKNEVLLVAKLQHRNLVKLLGFCLEGRERLLVYEFVPNKSLDYFIFDPTKKEQLDWQRRYKIIGGIARGLLYLHEDSRLRIIHRDLKASNILLDDEMNPKISDFGMARLFVMDETQGNTSRIVGTYGYMAPEYAMHGQFSVKSDVFSFGVLVLEIVSGQKNSGFHHGENVEDLLSFAWRNWRDGTPTNIIDPSLNNSSRNEIMRCIHIGLLCVQENLADRPTMATVALMLNSFSLTLPVPLEPAFYMDSKTRSLTNMQSWEDNSEVIRSSESMRIISPRE. 664
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07650 663 Gene3D Transferase(Phosphotransferase) domain 1 419 619 - -
Seca8g07650 663 ProSiteProfiles Gnk2-homologous domain profile. 133 240 IPR002902 -
Seca8g07650 663 FunFam Cysteine-rich receptor-like protein kinase 10 135 240 - -
Seca8g07650 663 ProSitePatterns Serine/Threonine protein kinases active-site signature. 464 476 IPR008271 GO:0004672|GO:0006468
Seca8g07650 663 Gene3D - 24 126 IPR038408 -
Seca8g07650 663 Gene3D - 133 240 IPR038408 -
Seca8g07650 663 FunFam cysteine-rich receptor-like protein kinase 10 419 620 - -
Seca8g07650 663 CDD STKc_IRAK 349 614 - -
Seca8g07650 663 MobiDBLite consensus disorder prediction 251 273 - -
Seca8g07650 663 Pfam Salt stress response/antifungal 33 124 IPR002902 -
Seca8g07650 663 Pfam Salt stress response/antifungal 144 237 IPR002902 -
Seca8g07650 663 ProSitePatterns Protein kinases ATP-binding region signature. 349 371 IPR017441 GO:0005524
Seca8g07650 663 Pfam Protein tyrosine and serine/threonine kinase 346 609 IPR001245 GO:0004672|GO:0006468
Seca8g07650 663 FunFam Cysteine-rich receptor-like protein kinase 10 304 418 - -
Seca8g07650 663 SMART serkin_6 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07650 663 SUPERFAMILY Protein kinase-like (PK-like) 331 644 IPR011009 -
Seca8g07650 663 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 22 127 - -
Seca8g07650 663 Gene3D Phosphorylase Kinase; domain 1 304 418 - -
Seca8g07650 663 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 33 654 - -
Seca8g07650 663 ProSiteProfiles Protein kinase domain profile. 343 617 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07650 663 ProSiteProfiles Gnk2-homologous domain profile. 23 127 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07650 Seca-Chr8 173827636 173831047 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07650 7 632 Receptor kinase-like Gene Family AT4G21410 53.395 0.0 649
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca8g07650 PK_Tyr_Ser-Thr 1.6e-45 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07650 - - gmx:100782800 904.434