Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07649 ATGTTTAATTTTATTATAATTGTGGATATAGGATGCAAAGGTGTCAAGGGTGCACAACCTGGTCTAGTTCTCTCATGGGCTCAAAGAGTTAAAATTGTTGTTGGTGCTGCTAGAGGACTTGAATATCTTCATGAAAAGGCAGAGACTCATATTATCCTTCGTTACATTAAGTCCAGTAACATAATGCTTTTCGATGATGATGTTGCAAAGATTGCTGATTTTGATTTGCCAAATCAAGCCCCTGATGCAGCAGCACGCACGACTTCATTCTACCCGTGTTCTTGGAATCTTTGGTTATCATGCTCCAGAATGCCTATAGGAAATGGTGGTTCAGAAAATCGAGAAAACTCGATTGTACACGGCCTTCAAACTGTATAG 378 0.3968 MFNFIIIVDIGCKGVKGAQPGLVLSWAQRVKIVVGAARGLEYLHEKAETHIILRYIKSSNIMLFDDDVAKIADFDLPNQAPDAAARTTSFYPCSWNLWLSCSRMPIGNGGSENRENSIVHGLQTV. 126
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07649 125 ProSiteProfiles Protein kinase domain profile. 1 125 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07649 125 PANTHER PTO-INTERACTING PROTEIN 1-LIKE 9 89 - -
Seca8g07649 125 Pfam Protein kinase domain 27 84 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07649 125 SUPERFAMILY Protein kinase-like (PK-like) 22 86 IPR011009 -
Seca8g07649 125 Gene3D Transferase(Phosphotransferase) domain 1 16 100 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07649 Seca-Chr8 173820640 173821646 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07649 24 87 Receptor kinase-like Gene Family AT5G38990 50.000 8.62e-15 67.8
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_RLCK-VIII Seca8g07649 Pkinase 7.3e-08 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07649 K13436 - gmx:547595 136.732