Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07647 ATGCTGCCAACAATACACAAAACTTCCACTACTTCTGTGATCAAACTAACGACAGAGGTAACTACACAGCCAATAGCACCTACCACAGGAACCTCAACATCCACCCTCACTTCCAACACACAAATTGACTACGGTTTCTACAATTTGTCCTATGGCAAAAACAGTACTACTGACAAAGTAAACGCCATTGGGCTGTGCAGAGGAGATGTTAAGGCAGATGATTGCCTTAGATGCCTCAACGGTTCAAGAGCCAATCTCACACAACTCTGTCCGAACCGAAAAGAGGCAATTGGGTGGTATGAGGATGAGAAATGCATGTTGCGTTACTCAGACAGCTCAATATTTGGCATCATGGAAACTGGACCTGCCTATTACGCGAACAACCTGAAGGATGCAACCGACTTGGATGAGTTCAATCAAGTGGTTAGAACCTTGCTGGATAACTTAACAAGCATAGCTGCATCAGGTGACTCACGTCATAAATATGCTGCATCAAGTGCACCTGCTTCTAATGATCAAACCATATATGGTCTAGTTCAGTGCACGCCTGATTTGTCCAAGTCACAATGCAGTGACTGCTTGGTTCAGTCTATTGCACGCATACCAATAGATTGTTGTAAAAACAAGATAGGTGGCAGGGTTGTTAGGCCCAGTTGTAATATGAGATTTGAAACCTCATTCCGCTTCTATGATCCTACAGCAACACCGCCTCCTCCTCCATCCACCACCACCACTAGTAACACTTCCTCACAAGGAAATAGCAACAAAAATACCACCGTGATCGCCATAGTAGTAGCAGTTGTTGTTGCTCATTTTTATATGCGTCTATTTAAGAGTGAAGAGGAAGCCAAAGAAAACGTTTCAAAATTTCTGCATAAGTATGCTGAAGAAGATGATGATGAAGAAATTTCAATTTCTAAGTCTTTCCAATTCGACTTTAACACCATACGAGAAGCTACAGACGACTTCTCTGATTCTAATAAACTTGGACAAGGCGGATTTGGTGCTGTTTACAAGGGCATTCTCTCCAATGGACAAGAGGTTGCTGTCAAAAGGTTGTCAAGGGATTCTGGCCAAGGGGATCTAGAATTTAAGAATGAAGTGCTTTTAGTTGCTAAGCTTCAACACCGAAATTTAGTTACGCTACTTGGTTTCTGTCTAGAAAGAAGAGAAAGGCTACTTATCTATGAATTTGTTCCTAATAAAAGTCTTGATTACTTCATATTTGATCAAATCCAGAGAGCACAATTAGATTGGGAAAAACGCTACAAAATCATTGCAGGTATTGCTCAAGGCATTCTTTACCTTCACGAGGATTCTCGACTGCGCATTATCCATCGTGATCTAAAAGCAAGCAACATTCTCTTAGATGAAGAAATGAATCCTAAGATATCAGATTTTGGCATGGCAAGACTATTTGTTGTGGACCAAACTCAGGGAAATACAAATAGAATTGCTGGAACCTTTTTTGGTGTGCTGGTTCTTGAGATTGTAAGTGGCCAAAAAAACAGTGGGATTCGTCATGGGGAGAATATAGAGGATCTATTGAGCATTGTATGGAAAAATTGGAGGGATGGGTCAGCAACAAATATTATAGATTCCACATTAAACAATTATTCACTAAATGAAATAATGAGATGCATCCACATTGGGTTACTATGTGTTCAAGAAAATATAGCTTGCAGACCAACCATGGCTTCCATTCTACTGATGCTTAATAGATCTTCTGTCACTCTGCCGGTACCTTCAGAACCTGCGTTTTATGTGGATAGTAGAACTGAAAACCTTCCAAACATGCAGTGGTGGGAGCATAATTCAGGGGCAACAAGATCTAGCGGATCAACAACTAAATCTGCTCAACATTCTATCAATGAGGCTTCAATTACAGAGTTATATCCTCGGTAG 1905 0.4079 MLPTIHKTSTTSVIKLTTEVTTQPIAPTTGTSTSTLTSNTQIDYGFYNLSYGKNSTTDKVNAIGLCRGDVKADDCLRCLNGSRANLTQLCPNRKEAIGWYEDEKCMLRYSDSSIFGIMETGPAYYANNLKDATDLDEFNQVVRTLLDNLTSIAASGDSRHKYAASSAPASNDQTIYGLVQCTPDLSKSQCSDCLVQSIARIPIDCCKNKIGGRVVRPSCNMRFETSFRFYDPTATPPPPPSTTTTSNTSSQGNSNKNTTVIAIVVAVVVAHFYMRLFKSEEEAKENVSKFLHKYAEEDDDEEISISKSFQFDFNTIREATDDFSDSNKLGQGGFGAVYKGILSNGQEVAVKRLSRDSGQGDLEFKNEVLLVAKLQHRNLVTLLGFCLERRERLLIYEFVPNKSLDYFIFDQIQRAQLDWEKRYKIIAGIAQGILYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFVVDQTQGNTNRIAGTFFGVLVLEIVSGQKNSGIRHGENIEDLLSIVWKNWRDGSATNIIDSTLNNYSLNEIMRCIHIGLLCVQENIACRPTMASILLMLNRSSVTLPVPSEPAFYVDSRTENLPNMQWWEHNSGATRSSGSTTKSAQHSINEASITELYPR. 635
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07647 634 Pfam Protein kinase domain 324 482 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07647 634 ProSitePatterns Serine/Threonine protein kinases active-site signature. 444 456 IPR008271 GO:0004672|GO:0006468
Seca8g07647 634 MobiDBLite consensus disorder prediction 604 627 - -
Seca8g07647 634 MobiDBLite consensus disorder prediction 230 253 - -
Seca8g07647 634 ProSiteProfiles Gnk2-homologous domain profile. 120 228 IPR002902 -
Seca8g07647 634 Gene3D Phosphorylase Kinase; domain 1 284 398 - -
Seca8g07647 634 Pfam Salt stress response/antifungal 133 225 IPR002902 -
Seca8g07647 634 Pfam Salt stress response/antifungal 39 111 IPR002902 -
Seca8g07647 634 Gene3D Transferase(Phosphotransferase) domain 1 399 489 - -
Seca8g07647 634 Gene3D Transferase(Phosphotransferase) domain 1 490 579 - -
Seca8g07647 634 Gene3D - 122 227 IPR038408 -
Seca8g07647 634 Gene3D - 12 113 IPR038408 -
Seca8g07647 634 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 31 633 - -
Seca8g07647 634 FunFam G-type lectin S-receptor-like serine/threonine-protein kinase B120 399 490 - -
Seca8g07647 634 SMART serkin_6 323 548 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07647 634 ProSiteProfiles Protein kinase domain profile. 323 634 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07647 634 FunFam Cysteine-rich receptor-like protein kinase 10 282 398 - -
Seca8g07647 634 MobiDBLite consensus disorder prediction 604 634 - -
Seca8g07647 634 ProSiteProfiles Gnk2-homologous domain profile. 7 114 IPR002902 -
Seca8g07647 634 FunFam Cysteine-rich receptor-like protein kinase 10 122 228 - -
Seca8g07647 634 ProSitePatterns Protein kinases ATP-binding region signature. 329 351 IPR017441 GO:0005524
Seca8g07647 634 SUPERFAMILY Protein kinase-like (PK-like) 311 600 IPR011009 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07647 Seca-Chr8 173816669 173820521 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07647 24 634 Receptor kinase-like Gene Family AT4G38830 46.677 0.0 535
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca8g07647 Pkinase 2.4e-33 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07647 - - lang:109335396 757.673