Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07643 ATGCTTCTCTTCAACACTCTCCCTGTTTCAAAAGTTGGATTTCTGCTCCTCTGTCTGTTTGGATGGCTTACGTCATCAATCTCAGCAGCTCCCAATTACAACGCTATTTACTGCCCAAACAACGCCACCTACAAATCCAACAACACGTTCCAAACCAATCTCAATGTCCTCCTCTCTTCTCTCATCTCCAACGCCACCCTAGGCGTTGACTCTTACTCCACCAACATGGGCTTCGGCTCCACCAACGCCGTCAACGGCCTCTTCCTCTGCCGTGGCGATGTCTCCTCCGCCACCTGTCAGGAGTGTGTCGCCACATCAGTCACAGAGATAACACGGCTCTGCCCCAACCAAACAGAGTCCATCATATGGTACGATGAGTGCATGCTGCGTTACACGAACCGTTACTTTTCCCCTACAAGCATCATCCCAAGAGCGAACCTGAGAGATGACAAAAACATCTCCACCTCGGATTTGGAGAGCTTCAATGAGATGTTGTCAAGCTTCTTGAGCAGTTTGGCAACAGAAGCTGCGAGATCCCAGACAGCGAAGAAATTTGCCACAGAGGAACGGAACTTCACAGCCTCGTCCTCGCAGGTGTATGGCCTAGCGCAGTGCGCGCCAGGCTTGACGAATGCTCAGTGTGAGGAGTGTTTGGTAAATGCGTCGAGAACTCTTGTCGCGTGTTGTGAAGGAAAACAAGGTGCCAGAGCCCTGCTTGCGTGGTGTAATATCAGATACGAAATGTTTCAGTTTTACAATACAAGCAATGATGAATCAGCACCATCACCACCAGTTCCTCCTCCTCCAGAAAATAAAAAGTCCAAGTCACGAACTGCCATCATTGTTATCCTGGTCGCTGTTTCTACAATTCTCGTTTGTTCGGGCTGCTATTTCCTTATTAGAAGATCACGAAAGAATTACAAGACTCTTTTAAAAGAAAATTTTGGAGATGAAAGTGCCACTTTGGAGTCACTACAATTTAATTTGGCGACAATTGAGGCAGCTACAAAGAAGTTTTCACCTGAAAATAAAATAGGCAAGGGAGGATTCGGAGAGGTTTACAAGGGTATTCTTATTGATGGACGGGAAATAGCTGTAAAAAAACTCTCCCAAGGTTCAGGACAAGGAGCAATAGAGTTCAAGAATGAGATTTTACTTATAGCAAAACTTCAACACAGAAACTTGGTGACACTATTAGGGTTTTGCTTGGAAGATCGAGAGAAAATGCTCATTTATGAATATGTGTCCAATAAAAGCCTTGATTACTTTCTATTTGATCCCTACAAGAGCAGGTTATTAAATTGGTTTGAGCGTTACAAAATCATTGAAGGAGTTGCTCGAGGAATACATTACCTACACGACCATTCAAGATTGAAAGTTATACATCGTGATCTCAAACCTAGTAATGTGTTACTAGATGATAATATGAATCCAAAAATATCTGATTTTGGCATGGCAAGAATGATTGCTTTAGATCAAGATCGAGGAAGTACAAATAGAATTGTTGGAACATATGGTTACATGTCTCCAGAATATGCAATGCATGGACAATTTTCAGAAAAATCAGACATCTTTAGTTTTGGAGTCATAATCTTGGAGGTAATTAGTTCAAAGAGGAATGCTCGCTCGCTTTTATCTGACAATGTCGATGACCTCTTGAGTAATGCTTGGAGACAATGGAAGAATCAAACACCATTACAAATATTAGACCCGCATATAAAAGAATCTTGCAACCATAGTGAAGTCATCAAGTGCATCCAAATTGGTTTATTATGTGTCCAAGAAAAGCCAGATGATAGACCAACGATAGCAAATGTTGTGTCATATCTCACTGCCCCTCTAACTGAATTGCCATTTCCAGGAGAACCGACAAATTATATGCATACTAAAATATTGCAAAGGATGGTAGCAGGGGAGTTGAGTTCAAGTTCCATTTCTGTATTTGTAATAATCGTATCGCAAGCCAGCGCCCAGGATCCAGTATCCTGTGATAACGATAGAGGCAACTATACAGCCAATAGCACCTATGACAACAACCTCCACACCCTTTTATCCAGCTTCTCTTCCCACACAGAAATTAACTATGGTTTCTACAATTTCTCATATGGCCAAAACACAGATAAAGTATACGCCATTGGGTTGTGTAAAGGAGATCTTAAGCCAGATGAGTGCCGTGGATTACTAAACGACTCCGCCGTTTATCTCAGAAAGCAGTGTCCATACCAGAAAGAGGCAATTGTGTGGACTGGCAATTGCACGTTGTGGTACTCCAACCGCTCTATATTTGACGTCTTGGAAATTCATTCACCTACAATTTACTTAATCTACGAAAGGCCTGTAAATGAGGTGGATCAGTTCAATGAAGTGCTCAAAGACTTGATGAGAAATCTGAAAAACAGAGCTGCATCAGGTGACTCTCGTCGTAAGTATGCCACAGATAATGTCACTGATGCAAATTTTCAAACAATATACGGTCTTGTGCAGTGCATGGCTGATTTGTCAGGACAAGAATGCAATGATTGCTTGGATCAAGCTATCTCTGAAATTCAAACTTGTTGTAAGGGCAAGATGGGAGGAAATATTCTTAAACCCAGTTGTCGTCTTAGATTTGATCCCTACCGCTTCTACGGACCTACCACCATATTAGACCAAGAGGCAGGAAAGAGCAACAAAACACGAACTGTCGTCATCGTCGCCGTAGCAGTGCCGGTTGTCACTGTCGTTTTGGTGTTTAGTTTTATTTGCATCTATTCAAGAATGATAAAGTCAAGAAAATTTTTTGCAAAGGGAAAAGATGATAGTGAAGATGAAATTACAATTGCTGAGTCATTGCAATTCAACTTTGACACCATACGAGTTGCTACAAGTGACTTCTCTGATTCTAACAAACTTGGACAAGGTGGATTTGGAGCAGTTTATTGGGGCAAGCTCTCTAATGGACAGGTTATTGCTGTCAAAAGATTATCAAGGAATTCTAACCAAGGAGATGTGGAATTTAAGAACGAAGTGCTTTTAGTGGCCAAGCTTCAACACCGAAATTTAGTTAGGCTACTTGGTTTCAGTCTAGAAAGGAGAGAAAGGCTACTTGTCTATGAATTTGTTCCTAATAAAAGCCTTGATTACTTCATATTTGAACCCACAAGGAAAACACAATTGAATTGGGAAATGCGCTACAAAATCATTAGAGGCATTGCTCGAGGCCTTCTTTACCTTCACGAGGATTCTCGATTGCGTATTATACATCGTGATCTCAAAGCAAGCAATATTCTCTTAGATGAAGAGATGAATCCTAAGATATCAGATTTTGGTATGGCAAGATTGTTTGTTGTGGATCAAACTCAAGGAAATACAAATAGAATTGTTGGAACCTATGGATATATGGCACCTGAGTATGCAATGCATGGATTGTTTTCAATAAAATCTGATGTCTTTAGCTTTGGTGTACTAGTTCTTGAGATTGTAAGTGGTCAAAAAAACAGTAGGAGCATTCGTCATATGGAGAATGAGGAGTATCTTCTAGGCTTTGTTTGGAGAAATTGGAGGGAGGGGACAATTACAAACATTATAGATCCATCATTAAACAACAGTTCACGAAATGAAATGATGAGATGCATCCACATTGGCTTACTCTGTGTTCAAGAAAATTTAGTTGACAGACCAACTATGGCTACCATTGCACTCATGCTTAACAGCTATTCTCTCACTCTCCCAATACCTTCAGAACCTGCTTTTTTTATAGAAGATAGAACTAGAAACCTTACAGACATGCGGTCATGGGATAATTCCGAGGCAACTAGATCAAGTGAATCCACAAATAAACTAGCTCAAGAATCGGTTAATGAAGCTTCCATTACTGACCTATACCCTCGCTAG 3873 0.4103 MLLFNTLPVSKVGFLLLCLFGWLTSSISAAPNYNAIYCPNNATYKSNNTFQTNLNVLLSSLISNATLGVDSYSTNMGFGSTNAVNGLFLCRGDVSSATCQECVATSVTEITRLCPNQTESIIWYDECMLRYTNRYFSPTSIIPRANLRDDKNISTSDLESFNEMLSSFLSSLATEAARSQTAKKFATEERNFTASSSQVYGLAQCAPGLTNAQCEECLVNASRTLVACCEGKQGARALLAWCNIRYEMFQFYNTSNDESAPSPPVPPPPENKKSKSRTAIIVILVAVSTILVCSGCYFLIRRSRKNYKTLLKENFGDESATLESLQFNLATIEAATKKFSPENKIGKGGFGEVYKGILIDGREIAVKKLSQGSGQGAIEFKNEILLIAKLQHRNLVTLLGFCLEDREKMLIYEYVSNKSLDYFLFDPYKSRLLNWFERYKIIEGVARGIHYLHDHSRLKVIHRDLKPSNVLLDDNMNPKISDFGMARMIALDQDRGSTNRIVGTYGYMSPEYAMHGQFSEKSDIFSFGVIILEVISSKRNARSLLSDNVDDLLSNAWRQWKNQTPLQILDPHIKESCNHSEVIKCIQIGLLCVQEKPDDRPTIANVVSYLTAPLTELPFPGEPTNYMHTKILQRMVAGELSSSSISVFVIIVSQASAQDPVSCDNDRGNYTANSTYDNNLHTLLSSFSSHTEINYGFYNFSYGQNTDKVYAIGLCKGDLKPDECRGLLNDSAVYLRKQCPYQKEAIVWTGNCTLWYSNRSIFDVLEIHSPTIYLIYERPVNEVDQFNEVLKDLMRNLKNRAASGDSRRKYATDNVTDANFQTIYGLVQCMADLSGQECNDCLDQAISEIQTCCKGKMGGNILKPSCRLRFDPYRFYGPTTILDQEAGKSNKTRTVVIVAVAVPVVTVVLVFSFICIYSRMIKSRKFFAKGKDDSEDEITIAESLQFNFDTIRVATSDFSDSNKLGQGGFGAVYWGKLSNGQVIAVKRLSRNSNQGDVEFKNEVLLVAKLQHRNLVRLLGFSLERRERLLVYEFVPNKSLDYFIFEPTRKTQLNWEMRYKIIRGIARGLLYLHEDSRLRIIHRDLKASNILLDEEMNPKISDFGMARLFVVDQTQGNTNRIVGTYGYMAPEYAMHGLFSIKSDVFSFGVLVLEIVSGQKNSRSIRHMENEEYLLGFVWRNWREGTITNIIDPSLNNSSRNEMMRCIHIGLLCVQENLVDRPTMATIALMLNSYSLTLPIPSEPAFFIEDRTRNLTDMRSWDNSEATRSSESTNKLAQESVNEASITDLYPR. 1291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07643 1290 Gene3D Transferase(Phosphotransferase) domain 1 1034 1235 - -
Seca8g07643 1290 Gene3D Transferase(Phosphotransferase) domain 1 415 617 - -
Seca8g07643 1290 ProSiteProfiles Gnk2-homologous domain profile. 141 251 IPR002902 -
Seca8g07643 1290 ProSitePatterns Protein kinases ATP-binding region signature. 345 368 IPR017441 GO:0005524
Seca8g07643 1290 ProSiteProfiles Gnk2-homologous domain profile. 32 136 IPR002902 -
Seca8g07643 1290 SMART serkin_6 339 610 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07643 1290 SMART serkin_6 958 1233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07643 1290 ProSiteProfiles Protein kinase domain profile. 958 1233 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07643 1290 ProSiteProfiles Gnk2-homologous domain profile. 768 875 IPR002902 -
Seca8g07643 1290 Pfam Protein tyrosine and serine/threonine kinase 961 1226 IPR001245 GO:0004672|GO:0006468
Seca8g07643 1290 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 656 761 - -
Seca8g07643 1290 MobiDBLite consensus disorder prediction 1257 1290 - -
Seca8g07643 1290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 460 472 IPR008271 GO:0004672|GO:0006468
Seca8g07643 1290 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 663 1288 - -
Seca8g07643 1290 FunFam cysteine-rich receptor-like protein kinase 10 415 617 - -
Seca8g07643 1290 ProSiteProfiles Protein kinase domain profile. 339 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07643 1290 ProSiteProfiles Gnk2-homologous domain profile. 658 761 IPR002902 -
Seca8g07643 1290 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 31 136 - -
Seca8g07643 1290 CDD STKc_IRAK 345 611 - -
Seca8g07643 1290 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1079 1091 IPR008271 GO:0004672|GO:0006468
Seca8g07643 1290 FunFam cysteine-rich receptor-like protein kinase 10 1034 1236 - -
Seca8g07643 1290 FunFam Cysteine-rich receptor-like protein kinase 10 144 251 - -
Seca8g07643 1290 SUPERFAMILY Protein kinase-like (PK-like) 323 631 IPR011009 -
Seca8g07643 1290 ProSitePatterns Protein kinases ATP-binding region signature. 964 986 IPR017441 GO:0005524
Seca8g07643 1290 Gene3D - 32 136 IPR038408 -
Seca8g07643 1290 Gene3D - 660 760 IPR038408 -
Seca8g07643 1290 Gene3D - 146 251 IPR038408 -
Seca8g07643 1290 Gene3D - 773 875 IPR038408 -
Seca8g07643 1290 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 300 414 - -
Seca8g07643 1290 FunFam Cysteine-rich receptor-like protein kinase 10 770 875 - -
Seca8g07643 1290 SUPERFAMILY Protein kinase-like (PK-like) 944 1260 IPR011009 -
Seca8g07643 1290 FunFam Cysteine-rich receptor-like protein kinase 10 921 1033 - -
Seca8g07643 1290 MobiDBLite consensus disorder prediction 1257 1283 - -
Seca8g07643 1290 Gene3D Phosphorylase Kinase; domain 1 921 1033 - -
Seca8g07643 1290 Gene3D Phosphorylase Kinase; domain 1 302 414 - -
Seca8g07643 1290 Pfam Protein kinase domain 341 608 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07643 1290 CDD STKc_IRAK 964 1230 - -
Seca8g07643 1290 Pfam Salt stress response/antifungal 38 133 IPR002902 -
Seca8g07643 1290 Pfam Salt stress response/antifungal 156 247 IPR002902 -
Seca8g07643 1290 Pfam Salt stress response/antifungal 783 871 IPR002902 -
Seca8g07643 1290 Pfam Salt stress response/antifungal 663 758 IPR002902 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07643 Seca-Chr8 173759922 173775005 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07643 31 658 Receptor kinase-like Gene Family AT4G21410 38.991 2.30e-150 468
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca8g07643 PK_Tyr_Ser-Thr 1.2e-44 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07643 - - lang:109353867 1286.94