Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g07642 | ATGATTCCTTCACTTGAGCTGCTTTCCTTCCTTCCTCTCATCCTCTTTCTCATACTCAAATCTGAAGCCAACGACCAGCTAAGTTTCCTGTACCACGATTGTAACGAAATCCACGGAAATATTACCCGGGGCAGTAACTACGGAAACAACCGGGATGCAGTTTTTCAAAAGATCTATACTGATACAGAAATTGATTACGGCTTCTACAACTTCTCCTACGGCAAAGACTCTGACAAAGTTAACGCAATAGGGCTCTGTAGAGGAGATGTTAAACCAGATGTCTGCCGTAGTTGCCTGTACAAATCCGCGGTCCTTCTCTCAGAGCGGTGCTCAGCACAGAAAGAGGCAATTGGATACTATGACAATTGCACGTTACGCTATTCCAACGACTCAATATTTGGTATCATGGAAACTAAAACTTCCCAAGTTTACTGCCACCTAAATGCCTCCGCAGAAGTCGATGATCGCTTCAATCAAACCCTCCACAGCTTGCTAGATAGACTGAAAACCACCGCGGCAGACGGTGACTCCCGTCTGAAATTTGCTGAAGATAGTGCTCCAGTTCAATCAAGCAATTATAACAGTACTATATACGCTCTCCTTCAGTGCACGCCTGATTTGTCTAAGGAAGAATGTGCTCGGTGCTTGGAATCGTCTTTTGTGAACAACATGTTTTCAATACCCTGTGATGTAGAGGGAGGCATTCGGTACATAGGACCAAGTTGTTCGGTGAGATATGAGACCCACGCCTTTTTTGACCCCATACTCATTGATGCACCAGCCCCACAGCCTTCGCAAGCACTTTATCCACCCCCATCTCCCACCACCACATCTAGCCAAGGAAAGAGCAAGACATTTCGGACGGTCATTGCAGTAGTTATTCCAGTCGTTGCGGTTGCTGTATTCCTCATCGTTTTCCGCATTTATGTAGGAGCGAGAAAATCGAGGCACGACTATATGGATGGACAGGATGGTGAAGGTGAAGGTGAAGGTGAAGGTGATGATGACATTAAAGCTTCCGAGTTGTTGCAATTTGACTTTGCAACCATCAGATTTGCTACAAACAACTTCTCTGATGCAAATAAGCTTGGCCAAGGTGGATTTGGAAGTGTTTACAAGGGTAGGCTCTCGGATGGACAAGAAGTTGCTATTAAAAGGTTGTCTAACAATTCTGACCAAGGAGAAACAGAATTTAAGAACGAAGTGTTGCTAACGGGGAAGCTTCAGCACCGAAACTTAGTTAAGCTACTAGGTTTTTGTTTAGAAAGAAGAGAAAGGCTACTGATATATGAGTTTGTCTCCAACAAAAGTCTTGATTATTTCATATTTGATCCAATCAAGCGTGCAATTTTGGATTGGGAAGTACGCTCCAAAATTATAAGAGGCATTGCACGTGGTCTTCTTTATCTTCATGAAGATTCTCGACTACAAATTATTCACCGAGATTTAAAAACAAGTAACATTCTGTTAGATGCAGAGTTGAGCCCAAAAATATCAGATTTTGGCATGGCAAGATTGTTTGATGTCAATCAAACTCAAGGCAATACAATGACGATTGTAGGGACTTTTGGATATATGGCTCCTGAGTACATTAAACATGGACAATTCTCAATAAAGTCAGATGTGTTTAGTTTTGGCGTAATGATTCTAGAAATTGTGTGTGGCCGAAGAAACAGTAGTGAGATTCGTAACGGGGACAATGTAGAGGATCTACTAAGCTTTGTAAGTGTGATACCTCTTCTCTTTGTTTTAAAGTTTGGAAGTATATGGTTATGGATCACATGA | 1785 | 0.4224 | MIPSLELLSFLPLILFLILKSEANDQLSFLYHDCNEIHGNITRGSNYGNNRDAVFQKIYTDTEIDYGFYNFSYGKDSDKVNAIGLCRGDVKPDVCRSCLYKSAVLLSERCSAQKEAIGYYDNCTLRYSNDSIFGIMETKTSQVYCHLNASAEVDDRFNQTLHSLLDRLKTTAADGDSRLKFAEDSAPVQSSNYNSTIYALLQCTPDLSKEECARCLESSFVNNMFSIPCDVEGGIRYIGPSCSVRYETHAFFDPILIDAPAPQPSQALYPPPSPTTTSSQGKSKTFRTVIAVVIPVVAVAVFLIVFRIYVGARKSRHDYMDGQDGEGEGEGEGDDDIKASELLQFDFATIRFATNNFSDANKLGQGGFGSVYKGRLSDGQEVAIKRLSNNSDQGETEFKNEVLLTGKLQHRNLVKLLGFCLERRERLLIYEFVSNKSLDYFIFDPIKRAILDWEVRSKIIRGIARGLLYLHEDSRLQIIHRDLKTSNILLDAELSPKISDFGMARLFDVNQTQGNTMTIVGTFGYMAPEYIKHGQFSIKSDVFSFGVMILEIVCGRRNSSEIRNGDNVEDLLSFVSVIPLLFVLKFGSIWLWIT. | 595 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g07642 | 594 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | 27 | 132 | - | - | |
Seca8g07642 | 594 | Pfam | Protein kinase domain | 358 | 564 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07642 | 594 | Gene3D | Phosphorylase Kinase; domain 1 | 330 | 432 | - | - | |
Seca8g07642 | 594 | SMART | serkin_6 | 357 | 591 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07642 | 594 | ProSitePatterns | Protein kinases ATP-binding region signature. | 363 | 385 | IPR017441 | GO:0005524 | |
Seca8g07642 | 594 | SUPERFAMILY | Protein kinase-like (PK-like) | 341 | 575 | IPR011009 | - | |
Seca8g07642 | 594 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 81 | 571 | - | - | |
Seca8g07642 | 594 | ProSiteProfiles | Gnk2-homologous domain profile. | 139 | 251 | IPR002902 | - | |
Seca8g07642 | 594 | Gene3D | Transferase(Phosphotransferase) domain 1 | 433 | 579 | - | - | |
Seca8g07642 | 594 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 478 | 490 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g07642 | 594 | ProSiteProfiles | Gnk2-homologous domain profile. | 29 | 132 | IPR002902 | - | |
Seca8g07642 | 594 | Gene3D | - | 26 | 131 | IPR038408 | - | |
Seca8g07642 | 594 | Gene3D | - | 138 | 251 | IPR038408 | - | |
Seca8g07642 | 594 | ProSiteProfiles | Protein kinase domain profile. | 357 | 594 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07642 | 594 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 322 | 432 | - | - | |
Seca8g07642 | 594 | Pfam | Salt stress response/antifungal | 152 | 248 | IPR002902 | - | |
Seca8g07642 | 594 | Pfam | Salt stress response/antifungal | 34 | 129 | IPR002902 | - | |
Seca8g07642 | 594 | FunFam | Lectin-domain containing receptor kinase A4.3 | 433 | 578 | - | - | |
Seca8g07642 | 594 | CDD | STKc_IRAK | 363 | 575 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g07642 | Seca-Chr8 | 173738089 | 173744596 | Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g07642 | 38 | 575 | Receptor kinase-like Gene Family | AT4G21410 | 47.541 | 8.56e-164 | 481 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca8g07642 | Pkinase | 2.9e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g07642 | - | - | tpra:123882259 | 702.59 |