Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g07640 | ATGGCTTCGAAATCCTTCAAGCTTTTCTTTCTGTTTGTCCTTATTAACACCCTCAGTTGTGTAACTACTAGAGCCCAAGGCCCTGTTTTTCTTTACCAGTTTTGCTATAGCAACGGAACCACCACTAATAGCACTTTTCAATTGGACCTAAGGACTCTTTTCTCTTCGTTATCTTCCAATGCCTCGGCCAACAATGAATTCTACAACACCACAGTCACCGGCAGAAACCCCTCCGACACAGCATATGGACTATTCATGTGCAGGGGTGACGTGTCCTCATGTGGACAGTGCGTGGAAAACTCAACTCAAAAACTATCATCAGACCAAGAGTGCTCCTTGTCCAAAGAGGCTGTGATTTGGTACGACGAGTGCATGGTTCGGTATTCCAACCGCTCTTTTTTCACCACCGTTGACACGAGGCCTGCTGTTTACTTGTTGAACTCAGCCAATACCTCGAACCAGGAAAGCTTCATGCGCTTGTTGTTCACCACCATGAACCAAACAGCTGATGAAGCAGCCAATTCTCCCACTGTCAAAAAGTACGCCACAAAGGAAGCAAACATTTCTGGATTTCAGACACTTTATTGCCTGGCTCAGTGCACAGAGGACTTGTCAAATTCAGATTGCAGAACTTGTCTTAGTGATGCCATAGGGGAACTTCCACAGTGCTGTGGAGGGAAGCAGGGAGGGAGAGTTCTATATCCAAGCTGTAATGTTAGGTATGAATTGTACCCTTTCTATAGCTCCCCTGCTCCCCCACCAACTCCTTCACCACCAGGGCTTGTTCCTCCAACCAATTCTTCTAATTCCGGAGGAAGTAGTGGGATCTCATCAGGGACAATTGTTGCAATTGTGGTTCCAATTACAGTGGCTGTGCTGCTATTTATAGTGGGAATTTGTTTCTTAAGTAAAAGAGCAAAGAAGGAGCGTGACTCTGCACAAGACCAAAAATCTGCAACTGAGATCACCACCGTGGAATCCTTGAGATTTGATTTCAGTACAATTGAAGTAGCCACAAACAAATTCTCTGGAGCTAATAAGCTAGGTGAAGGTGGTTTTGGTGAGGTTTACAAGGGCTTGCTTCCAAGTGGACAAGAAGTAGCTGTCAAGAGACTCTCTAAAAGCTCTGGACAAGGTGGGGAAGAATTTAAGAATGAAGTTGAGCTGGTTGCCAAGCTTCAACATAGAAATTTAGTGAGGCTTCTTGGATTTTGCTTGGAAAGAGAAGAAAAGATGCTTGTCTACGAATTTGTAGCCAACAAAAGTCTTGACTATATCCTTTTTGATCCTGAAAAGCAAAGGGGGCTAGATTGGACAAGGCGTTACAAGATTATTGGAGGGATTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAAAATTATTCACCGTGATCTCAAAGCTAGCAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTGGATCAAACTCAAGGAAATACCAGCAGAATAGTAGGGACATATGGTTACATGTCTCCAGAGTATGCAATGCATGGAGAGTACTCCGCTAAGTCTGATGTATACAGTTTTGGAGTCCTCATTTTAGAGATTATAAGTGGAAAGAAGAATAGTTCTTTCTATGAAACAGACGTTGCTGAGGATGCCTGGAAACTTTGGAAGGATGGAGCACCCTTGGAATTGATGGACCACACATTAAGAGAATCCTATACTCCAAATGAAGTTATCAGATGCATCCATATTGGTTTACTTTGTGTCCAAGAAGATCCAGCAGATAGACCTACAATGGCAACAATAGTGCTTATGCTAGATAGTCACTCCGTTACTCTACCGGTACCTAATCAGCCTGCATTTTTTCTACACAGTGGAACTGATTCAAACATGGTGATGAAACTGCAAACCAAAGCAGCTCCAATTTACAGTTCCCATTGCTGCACAGACTCTGCCAAATACCAATCTAACAGCACATTCCTTACCAATCTCAACCTCCTCCTCACTTCCCTTTCTTCCAACGCCACCGAAGGCAGCCATTTCTACAGAACAACAGTTGGCAGTGAAACCCCTAACGTCGTCCATGGCCTCTTCCTCTGCCGTGGCGACACCGTCACCACCGCCTGCCACGACTGCGTCACCGCCGCAGCGAAAGAGATAAAACGCCGGTGCCCGGTTGAGAAAGAAGCCATAATCTGGTACGACCTGTGCATGGTACGCTACTCCAACCAATATTATCTCAACAACATAGTTCCAAGTGTGGACATGTCTGATTCAAAGAGCGTGGCTGGCACAGACGTTAACAGGTTCAACGAATTGCTGGCTGGGTTGCTGAATTCTCTCGCAACGAAGGCTGCGAATTCTGAGAACGACAAGTTTGCAACAGGGGAAGTGAACTTCACGAGCTCAGTGACCCTTTATGGATTAGTGCAGTGCACGCCAGAGTTATCCTTGTTTGATTGCAACATGTGCTTCAGAAGCGCCATTGCTTCTGTTCCTAATTGCTGTGATGGGAAACAAGGAGCTAGGTCGTTGCTTCCGGGATGCAATATTAGATATGAGATCTATCCATTTTACAATAGCACCCGAACACTGACCCCACCGGTTCCAGTTGTTCAATCTCGTACTTCAGAAGTTTATTGTAATTTGGTTGCTGATAAATACTGTCTTCCTTTATCATATGTAGTTCGGGAGGATCTTACAGATGTAGAGTCCTTGCAATTTGACTTGGCTACAGTCCAAGCTGCCACGAACAGCTTCTCCGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGTGGTTTATAAGGGTATCCTCCCTAACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAAGGTGCAATAGAGTTCAGGAATGAAGCTACCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGGGTATTGGGATTTTGCTTGGAGGGGAGGGAGAAGATGCTTGTCTATGAGTACATACAAAACAAAAGCCTTGATCACTTTCTATTTGATCCGGTAAAGCAGAGAGAGTTAGATTGGTCAAGACGCTATAAGATAATAGTTGGCATTGCTCGAGGAATTCAATATCTCCATGAAGATTCCCAGCTTAGAATTATACATCGTGATCTCAAAGCTAGCAATGTTTTATTAGATGAAAATATGAATCCAAAGATTTCAGATTTTGGCATGGCGAAAATTTTCCAGGCAGATCAGACTCAAGTTAATACAGGAAGGATAGTTGGCACTTATGGTTACATGTCTCCAGAATATGCAATGCGTGGTCAGTTCTCTGTAAAATCAGATGTGTTCAGTTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGATTTTTATCAATCAAATCAGGCTAATGACCTCTTAAGCTATGCTTGGAAAAATTGGACAGATAAAACACCTTTGGAGTTGCTGGATCCAACACTGAGAGGCTCTTATTCAAGAAATGAAGTCATAAGATGCATCCATATTGGTTTATTGTGTGTTCAGGAAAATCCATCTGACAGGCCTTCAATGGCTACTATTGCACTTATGCTGAATAGTTATTCAGTTACCTTGTCATTACCTCGTCAGCCACCATCTTTCCTGCGTGGAAGAACACCTGACAAGCTAAAGCAGGGGGTTGATTCTGATCAGTCTACCTCCTGTTCAATTCCATGGTCTGTGAATGAAGTATCCATCACTGAAGTATACCCTCGATGA | 3747 | 0.4353 | MASKSFKLFFLFVLINTLSCVTTRAQGPVFLYQFCYSNGTTTNSTFQLDLRTLFSSLSSNASANNEFYNTTVTGRNPSDTAYGLFMCRGDVSSCGQCVENSTQKLSSDQECSLSKEAVIWYDECMVRYSNRSFFTTVDTRPAVYLLNSANTSNQESFMRLLFTTMNQTADEAANSPTVKKYATKEANISGFQTLYCLAQCTEDLSNSDCRTCLSDAIGELPQCCGGKQGGRVLYPSCNVRYELYPFYSSPAPPPTPSPPGLVPPTNSSNSGGSSGISSGTIVAIVVPITVAVLLFIVGICFLSKRAKKERDSAQDQKSATEITTVESLRFDFSTIEVATNKFSGANKLGEGGFGEVYKGLLPSGQEVAVKRLSKSSGQGGEEFKNEVELVAKLQHRNLVRLLGFCLEREEKMLVYEFVANKSLDYILFDPEKQRGLDWTRRYKIIGGIARGIQYLHEDSRLKIIHRDLKASNILLDGDMNPKISDFGMARIFGVDQTQGNTSRIVGTYGYMSPEYAMHGEYSAKSDVYSFGVLILEIISGKKNSSFYETDVAEDAWKLWKDGAPLELMDHTLRESYTPNEVIRCIHIGLLCVQEDPADRPTMATIVLMLDSHSVTLPVPNQPAFFLHSGTDSNMVMKLQTKAAPIYSSHCCTDSAKYQSNSTFLTNLNLLLTSLSSNATEGSHFYRTTVGSETPNVVHGLFLCRGDTVTTACHDCVTAAAKEIKRRCPVEKEAIIWYDLCMVRYSNQYYLNNIVPSVDMSDSKSVAGTDVNRFNELLAGLLNSLATKAANSENDKFATGEVNFTSSVTLYGLVQCTPELSLFDCNMCFRSAIASVPNCCDGKQGARSLLPGCNIRYEIYPFYNSTRTLTPPVPVVQSRTSEVYCNLVADKYCLPLSYVVREDLTDVESLQFDLATVQAATNSFSDENKIGQGGFGVVYKGILPNGQEIAVKRLSVTSLQGAIEFRNEATLVAKLQHRNLVRVLGFCLEGREKMLVYEYIQNKSLDHFLFDPVKQRELDWSRRYKIIVGIARGIQYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQSNQANDLLSYAWKNWTDKTPLELLDPTLRGSYSRNEVIRCIHIGLLCVQENPSDRPSMATIALMLNSYSVTLSLPRQPPSFLRGRTPDKLKQGVDSDQSTSCSIPWSVNEVSITEVYPR. | 1249 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g07640 | 1248 | PANTHER | PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA | 38 | 639 | - | - | |
Seca8g07640 | 1248 | Gene3D | Phosphorylase Kinase; domain 1 | 302 | 417 | - | - | |
Seca8g07640 | 1248 | Gene3D | Phosphorylase Kinase; domain 1 | 895 | 998 | - | - | |
Seca8g07640 | 1248 | FunFam | Cysteine-rich receptor-like protein kinase 25 | 141 | 246 | - | - | |
Seca8g07640 | 1248 | ProSiteProfiles | Gnk2-homologous domain profile. | 28 | 133 | IPR002902 | - | |
Seca8g07640 | 1248 | Gene3D | - | 758 | 861 | IPR038408 | - | |
Seca8g07640 | 1248 | Gene3D | - | 28 | 133 | IPR038408 | - | |
Seca8g07640 | 1248 | Gene3D | - | 140 | 246 | IPR038408 | - | |
Seca8g07640 | 1248 | Gene3D | - | 644 | 749 | IPR038408 | - | |
Seca8g07640 | 1248 | ProSitePatterns | Protein kinases ATP-binding region signature. | 929 | 951 | IPR017441 | GO:0005524 | |
Seca8g07640 | 1248 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 463 | 475 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g07640 | 1248 | ProSiteProfiles | Protein kinase domain profile. | 342 | 615 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07640 | 1248 | MobiDBLite | consensus disorder prediction | 252 | 272 | - | - | |
Seca8g07640 | 1248 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 304 | 417 | - | - | |
Seca8g07640 | 1248 | ProSitePatterns | Protein kinases ATP-binding region signature. | 348 | 370 | IPR017441 | GO:0005524 | |
Seca8g07640 | 1248 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 | 28 | 132 | - | - | |
Seca8g07640 | 1248 | FunFam | cysteine-rich receptor-like protein kinase 10 | 418 | 616 | - | - | |
Seca8g07640 | 1248 | MobiDBLite | consensus disorder prediction | 1210 | 1231 | - | - | |
Seca8g07640 | 1248 | Pfam | Protein tyrosine and serine/threonine kinase | 346 | 607 | IPR001245 | GO:0004672|GO:0006468 | |
Seca8g07640 | 1248 | Pfam | Protein tyrosine and serine/threonine kinase | 926 | 1191 | IPR001245 | GO:0004672|GO:0006468 | |
Seca8g07640 | 1248 | SUPERFAMILY | Protein kinase-like (PK-like) | 909 | 1214 | IPR011009 | - | |
Seca8g07640 | 1248 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 756 | 861 | - | - | |
Seca8g07640 | 1248 | ProSiteProfiles | Gnk2-homologous domain profile. | 645 | 749 | IPR002902 | - | |
Seca8g07640 | 1248 | ProSiteProfiles | Gnk2-homologous domain profile. | 139 | 246 | IPR002902 | - | |
Seca8g07640 | 1248 | CDD | STKc_IRAK | 929 | 1195 | - | - | |
Seca8g07640 | 1248 | Pfam | Salt stress response/antifungal | 150 | 244 | IPR002902 | - | |
Seca8g07640 | 1248 | Pfam | Salt stress response/antifungal | 39 | 130 | IPR002902 | - | |
Seca8g07640 | 1248 | Pfam | Salt stress response/antifungal | 768 | 858 | IPR002902 | - | |
Seca8g07640 | 1248 | Pfam | Salt stress response/antifungal | 651 | 747 | IPR002902 | - | |
Seca8g07640 | 1248 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 1044 | 1056 | IPR008271 | GO:0004672|GO:0006468 | |
Seca8g07640 | 1248 | SUPERFAMILY | Protein kinase-like (PK-like) | 327 | 630 | IPR011009 | - | |
Seca8g07640 | 1248 | CDD | STKc_IRAK | 348 | 610 | - | - | |
Seca8g07640 | 1248 | ProSiteProfiles | Gnk2-homologous domain profile. | 753 | 861 | IPR002902 | - | |
Seca8g07640 | 1248 | Gene3D | Transferase(Phosphotransferase) domain 1 | 418 | 616 | - | - | |
Seca8g07640 | 1248 | Gene3D | Transferase(Phosphotransferase) domain 1 | 999 | 1202 | - | - | |
Seca8g07640 | 1248 | FunFam | Cysteine-rich receptor-like protein kinase 10 | 890 | 998 | - | - | |
Seca8g07640 | 1248 | FunFam | cysteine-rich receptor-like protein kinase 10 | 999 | 1201 | - | - | |
Seca8g07640 | 1248 | ProSiteProfiles | Protein kinase domain profile. | 923 | 1198 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07640 | 1248 | FunFam | Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 | 644 | 749 | - | - | |
Seca8g07640 | 1248 | SMART | serkin_6 | 923 | 1198 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 | |
Seca8g07640 | 1248 | SMART | serkin_6 | 342 | 615 | IPR000719 | GO:0004672|GO:0005524|GO:0006468 |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g07640 | Seca-Chr8 | 173705884 | 173716316 | Dispersed/Tandem |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g07640 | 5 | 632 | Receptor kinase-like Gene Family | AT4G05200 | 55.194 | 0.0 | 672 |
Select | Regulatory Factors | Family | Gene | Hmm_acc | Hmm_name | E_value | Clan |
---|---|---|---|---|---|---|---|
PK | RLK-Pelle_DLSV | Seca8g07640 | PK_Tyr_Ser-Thr | 1.5e-49 | CL0016 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g07640 | - | - | gsj:114402115 | 1341.25 |