Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07640 ATGGCTTCGAAATCCTTCAAGCTTTTCTTTCTGTTTGTCCTTATTAACACCCTCAGTTGTGTAACTACTAGAGCCCAAGGCCCTGTTTTTCTTTACCAGTTTTGCTATAGCAACGGAACCACCACTAATAGCACTTTTCAATTGGACCTAAGGACTCTTTTCTCTTCGTTATCTTCCAATGCCTCGGCCAACAATGAATTCTACAACACCACAGTCACCGGCAGAAACCCCTCCGACACAGCATATGGACTATTCATGTGCAGGGGTGACGTGTCCTCATGTGGACAGTGCGTGGAAAACTCAACTCAAAAACTATCATCAGACCAAGAGTGCTCCTTGTCCAAAGAGGCTGTGATTTGGTACGACGAGTGCATGGTTCGGTATTCCAACCGCTCTTTTTTCACCACCGTTGACACGAGGCCTGCTGTTTACTTGTTGAACTCAGCCAATACCTCGAACCAGGAAAGCTTCATGCGCTTGTTGTTCACCACCATGAACCAAACAGCTGATGAAGCAGCCAATTCTCCCACTGTCAAAAAGTACGCCACAAAGGAAGCAAACATTTCTGGATTTCAGACACTTTATTGCCTGGCTCAGTGCACAGAGGACTTGTCAAATTCAGATTGCAGAACTTGTCTTAGTGATGCCATAGGGGAACTTCCACAGTGCTGTGGAGGGAAGCAGGGAGGGAGAGTTCTATATCCAAGCTGTAATGTTAGGTATGAATTGTACCCTTTCTATAGCTCCCCTGCTCCCCCACCAACTCCTTCACCACCAGGGCTTGTTCCTCCAACCAATTCTTCTAATTCCGGAGGAAGTAGTGGGATCTCATCAGGGACAATTGTTGCAATTGTGGTTCCAATTACAGTGGCTGTGCTGCTATTTATAGTGGGAATTTGTTTCTTAAGTAAAAGAGCAAAGAAGGAGCGTGACTCTGCACAAGACCAAAAATCTGCAACTGAGATCACCACCGTGGAATCCTTGAGATTTGATTTCAGTACAATTGAAGTAGCCACAAACAAATTCTCTGGAGCTAATAAGCTAGGTGAAGGTGGTTTTGGTGAGGTTTACAAGGGCTTGCTTCCAAGTGGACAAGAAGTAGCTGTCAAGAGACTCTCTAAAAGCTCTGGACAAGGTGGGGAAGAATTTAAGAATGAAGTTGAGCTGGTTGCCAAGCTTCAACATAGAAATTTAGTGAGGCTTCTTGGATTTTGCTTGGAAAGAGAAGAAAAGATGCTTGTCTACGAATTTGTAGCCAACAAAAGTCTTGACTATATCCTTTTTGATCCTGAAAAGCAAAGGGGGCTAGATTGGACAAGGCGTTACAAGATTATTGGAGGGATTGCTCGAGGCATTCAATATCTTCATGAAGATTCTAGGCTTAAAATTATTCACCGTGATCTCAAAGCTAGCAACATATTGTTGGATGGAGATATGAATCCAAAAATCTCAGATTTTGGCATGGCAAGAATATTTGGAGTGGATCAAACTCAAGGAAATACCAGCAGAATAGTAGGGACATATGGTTACATGTCTCCAGAGTATGCAATGCATGGAGAGTACTCCGCTAAGTCTGATGTATACAGTTTTGGAGTCCTCATTTTAGAGATTATAAGTGGAAAGAAGAATAGTTCTTTCTATGAAACAGACGTTGCTGAGGATGCCTGGAAACTTTGGAAGGATGGAGCACCCTTGGAATTGATGGACCACACATTAAGAGAATCCTATACTCCAAATGAAGTTATCAGATGCATCCATATTGGTTTACTTTGTGTCCAAGAAGATCCAGCAGATAGACCTACAATGGCAACAATAGTGCTTATGCTAGATAGTCACTCCGTTACTCTACCGGTACCTAATCAGCCTGCATTTTTTCTACACAGTGGAACTGATTCAAACATGGTGATGAAACTGCAAACCAAAGCAGCTCCAATTTACAGTTCCCATTGCTGCACAGACTCTGCCAAATACCAATCTAACAGCACATTCCTTACCAATCTCAACCTCCTCCTCACTTCCCTTTCTTCCAACGCCACCGAAGGCAGCCATTTCTACAGAACAACAGTTGGCAGTGAAACCCCTAACGTCGTCCATGGCCTCTTCCTCTGCCGTGGCGACACCGTCACCACCGCCTGCCACGACTGCGTCACCGCCGCAGCGAAAGAGATAAAACGCCGGTGCCCGGTTGAGAAAGAAGCCATAATCTGGTACGACCTGTGCATGGTACGCTACTCCAACCAATATTATCTCAACAACATAGTTCCAAGTGTGGACATGTCTGATTCAAAGAGCGTGGCTGGCACAGACGTTAACAGGTTCAACGAATTGCTGGCTGGGTTGCTGAATTCTCTCGCAACGAAGGCTGCGAATTCTGAGAACGACAAGTTTGCAACAGGGGAAGTGAACTTCACGAGCTCAGTGACCCTTTATGGATTAGTGCAGTGCACGCCAGAGTTATCCTTGTTTGATTGCAACATGTGCTTCAGAAGCGCCATTGCTTCTGTTCCTAATTGCTGTGATGGGAAACAAGGAGCTAGGTCGTTGCTTCCGGGATGCAATATTAGATATGAGATCTATCCATTTTACAATAGCACCCGAACACTGACCCCACCGGTTCCAGTTGTTCAATCTCGTACTTCAGAAGTTTATTGTAATTTGGTTGCTGATAAATACTGTCTTCCTTTATCATATGTAGTTCGGGAGGATCTTACAGATGTAGAGTCCTTGCAATTTGACTTGGCTACAGTCCAAGCTGCCACGAACAGCTTCTCCGATGAGAACAAGATTGGCCAAGGTGGATTTGGTGTGGTTTATAAGGGTATCCTCCCTAACGGACAGGAGATAGCTGTGAAGAGGTTGTCAGTAACCTCCTTGCAAGGTGCAATAGAGTTCAGGAATGAAGCTACCCTTGTGGCCAAGCTTCAACATAGAAATTTAGTGAGGGTATTGGGATTTTGCTTGGAGGGGAGGGAGAAGATGCTTGTCTATGAGTACATACAAAACAAAAGCCTTGATCACTTTCTATTTGATCCGGTAAAGCAGAGAGAGTTAGATTGGTCAAGACGCTATAAGATAATAGTTGGCATTGCTCGAGGAATTCAATATCTCCATGAAGATTCCCAGCTTAGAATTATACATCGTGATCTCAAAGCTAGCAATGTTTTATTAGATGAAAATATGAATCCAAAGATTTCAGATTTTGGCATGGCGAAAATTTTCCAGGCAGATCAGACTCAAGTTAATACAGGAAGGATAGTTGGCACTTATGGTTACATGTCTCCAGAATATGCAATGCGTGGTCAGTTCTCTGTAAAATCAGATGTGTTCAGTTTTGGTGTCTTAGTTTTGGAGATTGTGAGTGGCAAGAAGAACACTGATTTTTATCAATCAAATCAGGCTAATGACCTCTTAAGCTATGCTTGGAAAAATTGGACAGATAAAACACCTTTGGAGTTGCTGGATCCAACACTGAGAGGCTCTTATTCAAGAAATGAAGTCATAAGATGCATCCATATTGGTTTATTGTGTGTTCAGGAAAATCCATCTGACAGGCCTTCAATGGCTACTATTGCACTTATGCTGAATAGTTATTCAGTTACCTTGTCATTACCTCGTCAGCCACCATCTTTCCTGCGTGGAAGAACACCTGACAAGCTAAAGCAGGGGGTTGATTCTGATCAGTCTACCTCCTGTTCAATTCCATGGTCTGTGAATGAAGTATCCATCACTGAAGTATACCCTCGATGA 3747 0.4353 MASKSFKLFFLFVLINTLSCVTTRAQGPVFLYQFCYSNGTTTNSTFQLDLRTLFSSLSSNASANNEFYNTTVTGRNPSDTAYGLFMCRGDVSSCGQCVENSTQKLSSDQECSLSKEAVIWYDECMVRYSNRSFFTTVDTRPAVYLLNSANTSNQESFMRLLFTTMNQTADEAANSPTVKKYATKEANISGFQTLYCLAQCTEDLSNSDCRTCLSDAIGELPQCCGGKQGGRVLYPSCNVRYELYPFYSSPAPPPTPSPPGLVPPTNSSNSGGSSGISSGTIVAIVVPITVAVLLFIVGICFLSKRAKKERDSAQDQKSATEITTVESLRFDFSTIEVATNKFSGANKLGEGGFGEVYKGLLPSGQEVAVKRLSKSSGQGGEEFKNEVELVAKLQHRNLVRLLGFCLEREEKMLVYEFVANKSLDYILFDPEKQRGLDWTRRYKIIGGIARGIQYLHEDSRLKIIHRDLKASNILLDGDMNPKISDFGMARIFGVDQTQGNTSRIVGTYGYMSPEYAMHGEYSAKSDVYSFGVLILEIISGKKNSSFYETDVAEDAWKLWKDGAPLELMDHTLRESYTPNEVIRCIHIGLLCVQEDPADRPTMATIVLMLDSHSVTLPVPNQPAFFLHSGTDSNMVMKLQTKAAPIYSSHCCTDSAKYQSNSTFLTNLNLLLTSLSSNATEGSHFYRTTVGSETPNVVHGLFLCRGDTVTTACHDCVTAAAKEIKRRCPVEKEAIIWYDLCMVRYSNQYYLNNIVPSVDMSDSKSVAGTDVNRFNELLAGLLNSLATKAANSENDKFATGEVNFTSSVTLYGLVQCTPELSLFDCNMCFRSAIASVPNCCDGKQGARSLLPGCNIRYEIYPFYNSTRTLTPPVPVVQSRTSEVYCNLVADKYCLPLSYVVREDLTDVESLQFDLATVQAATNSFSDENKIGQGGFGVVYKGILPNGQEIAVKRLSVTSLQGAIEFRNEATLVAKLQHRNLVRVLGFCLEGREKMLVYEYIQNKSLDHFLFDPVKQRELDWSRRYKIIVGIARGIQYLHEDSQLRIIHRDLKASNVLLDENMNPKISDFGMAKIFQADQTQVNTGRIVGTYGYMSPEYAMRGQFSVKSDVFSFGVLVLEIVSGKKNTDFYQSNQANDLLSYAWKNWTDKTPLELLDPTLRGSYSRNEVIRCIHIGLLCVQENPSDRPSMATIALMLNSYSVTLSLPRQPPSFLRGRTPDKLKQGVDSDQSTSCSIPWSVNEVSITEVYPR. 1249
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07640 1248 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 38 639 - -
Seca8g07640 1248 Gene3D Phosphorylase Kinase; domain 1 302 417 - -
Seca8g07640 1248 Gene3D Phosphorylase Kinase; domain 1 895 998 - -
Seca8g07640 1248 FunFam Cysteine-rich receptor-like protein kinase 25 141 246 - -
Seca8g07640 1248 ProSiteProfiles Gnk2-homologous domain profile. 28 133 IPR002902 -
Seca8g07640 1248 Gene3D - 758 861 IPR038408 -
Seca8g07640 1248 Gene3D - 28 133 IPR038408 -
Seca8g07640 1248 Gene3D - 140 246 IPR038408 -
Seca8g07640 1248 Gene3D - 644 749 IPR038408 -
Seca8g07640 1248 ProSitePatterns Protein kinases ATP-binding region signature. 929 951 IPR017441 GO:0005524
Seca8g07640 1248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 463 475 IPR008271 GO:0004672|GO:0006468
Seca8g07640 1248 ProSiteProfiles Protein kinase domain profile. 342 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07640 1248 MobiDBLite consensus disorder prediction 252 272 - -
Seca8g07640 1248 FunFam Cysteine-rich receptor-like protein kinase 10 304 417 - -
Seca8g07640 1248 ProSitePatterns Protein kinases ATP-binding region signature. 348 370 IPR017441 GO:0005524
Seca8g07640 1248 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 28 132 - -
Seca8g07640 1248 FunFam cysteine-rich receptor-like protein kinase 10 418 616 - -
Seca8g07640 1248 MobiDBLite consensus disorder prediction 1210 1231 - -
Seca8g07640 1248 Pfam Protein tyrosine and serine/threonine kinase 346 607 IPR001245 GO:0004672|GO:0006468
Seca8g07640 1248 Pfam Protein tyrosine and serine/threonine kinase 926 1191 IPR001245 GO:0004672|GO:0006468
Seca8g07640 1248 SUPERFAMILY Protein kinase-like (PK-like) 909 1214 IPR011009 -
Seca8g07640 1248 FunFam Cysteine-rich receptor-like protein kinase 10 756 861 - -
Seca8g07640 1248 ProSiteProfiles Gnk2-homologous domain profile. 645 749 IPR002902 -
Seca8g07640 1248 ProSiteProfiles Gnk2-homologous domain profile. 139 246 IPR002902 -
Seca8g07640 1248 CDD STKc_IRAK 929 1195 - -
Seca8g07640 1248 Pfam Salt stress response/antifungal 150 244 IPR002902 -
Seca8g07640 1248 Pfam Salt stress response/antifungal 39 130 IPR002902 -
Seca8g07640 1248 Pfam Salt stress response/antifungal 768 858 IPR002902 -
Seca8g07640 1248 Pfam Salt stress response/antifungal 651 747 IPR002902 -
Seca8g07640 1248 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1044 1056 IPR008271 GO:0004672|GO:0006468
Seca8g07640 1248 SUPERFAMILY Protein kinase-like (PK-like) 327 630 IPR011009 -
Seca8g07640 1248 CDD STKc_IRAK 348 610 - -
Seca8g07640 1248 ProSiteProfiles Gnk2-homologous domain profile. 753 861 IPR002902 -
Seca8g07640 1248 Gene3D Transferase(Phosphotransferase) domain 1 418 616 - -
Seca8g07640 1248 Gene3D Transferase(Phosphotransferase) domain 1 999 1202 - -
Seca8g07640 1248 FunFam Cysteine-rich receptor-like protein kinase 10 890 998 - -
Seca8g07640 1248 FunFam cysteine-rich receptor-like protein kinase 10 999 1201 - -
Seca8g07640 1248 ProSiteProfiles Protein kinase domain profile. 923 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07640 1248 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 10 644 749 - -
Seca8g07640 1248 SMART serkin_6 923 1198 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07640 1248 SMART serkin_6 342 615 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07640 Seca-Chr8 173705884 173716316 Dispersed/Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07640 5 632 Receptor kinase-like Gene Family AT4G05200 55.194 0.0 672
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca8g07640 PK_Tyr_Ser-Thr 1.5e-49 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07640 - - gsj:114402115 1341.25