Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07636 ATGTTACTGCTATCAAAGATTAACAAACCCATTGACTCGTTGATGGCTCTCTTCAAGCTTGTTTTCTTCTTTATCTTTATCATCTTCAACAATTTTGTAACCGCTACAGCACAGGACGACCTGAATTATTATTGTTCAGGGGACAAAATCACCCCAAACAGCGCCTTCCAATTGAACCTCAGGACACTCCTCTCTTATTTATCTTCCAACGCCACTGGTAACAGGGAATTCTACAACACCACAGTCACCGGCAGAAACCATTCCGACACAGTCTATGGAATGTTCATGTGCTGGGGTGACATCCCCGCTCATCTCTGTAGCCAGTGTGTCAAAAACGTAACCCAGACTGTGATTTTGTATTCCAAACACTCCGGAATGGCCCAGGCCCAGATATCAACCGGCCCAGATCCAGATCGTTTATGTTCCTTGTACAATCAGGGTATTATTCGGTATGATGATGAGTGCATGGTTCGGTATTCTAACCACTCTTTCTTCTCCACAGCTGACTTAATTTCACCTTCTGCCAGCTGCTCCACTATCAGTACTGCTTCCAACTCCAACCTCCAGGCAGGGGCAAGGTTTGAGCATGTAGTTTCCAAAATCATGAACGAAGTGGCAGATGAGGCAGCCAATTTTTCTATTGGTGCCAAGAAGTATGCCACAAAACAAGCAAGAATATCTGATTTCCAAACGCTTTACTGTCAAGTTCAATGCACACCAGACCTCTCACCTCAAGACTGTAGAAAGTGTCTAAATGCTACCATATCGGGTCTGCAACAGTTCTGTAAAGGAAATTCGGTAGGCATGCAATCAACTCCCAGCTGTAACATCAGTAATGGGCCTGCACCATCAGGACTCATTCCTGTTGCCAATCATTCAGATTCAAAATACTCACAAGATCCTGGTTATCTTTCTCACAATTGTTCAAGCAATGAAACCATGATGAGTACTGCTTTTCTATCAAATCTCAGGATCCTCTTCTCTTCCTTGTCTTCCAACGCCACAACCAAAACCGGTTTCTTCAAGACCACAGTGGACGGTAGAAATCCCTTGGACACAGTTCATGGCCTTTTCATGTGCCGAAGTGATGTTTCCCCTGCCTTCTGTCAGCTCTGTATCCTGAACGCAACCACAAGAATATCCTTAGAATGCCCCTCCTCGAAAGAGGCAATCATTTGGTTGGATCACTGCTTGCTTCGCTATTCCAATCGATCTCTCTCTCCCACAGTGGAAACAAGTCCCAAATTTCATGAGTTTGATGTGGCCAACTCTTCCAACCCCAACTTGCTGCAGAGCTTCTTCACTTGGACACTAGCAAAAATTTTAAATAAAGTCGTGGAGACAGAGACAAGGGGCAGTACTATTAAGAATTATCGAACGAGATCAGAAAAACTGAATGATCAACAGACCCTCTATATTCTTGCTCAATGTACGCCAGATCTGCTTGATTGGGATTGCAGCGGTTGTTTACAAAATATTTTCCAATACGAAATTCCATGGTCTAGCTTGGCGAGTCCAGAGGGAAAAGTTCTATATCCTAGCTGCGTTATGATGTTTGGATTTTCCCAATTTTACCGGGACGGTGACGAAGCTGAGGCATTCACGCAAGCTGGTCCTCCTCCAACAACTAAAGGAGCTGAGGCGTTCAGGCAAGCTTCTCCTCCAACAAAAAATGAAAGGGGCAAGCCACAGACAATTATAGTTGTTGTCCCAATCATTCTTTCGGCTATACTATTTTCTTTTTGCTGCTGTTTGTTAAGGAAGAAAGCAGGAAAGAGTAGTTATAAAACTTTTCTCAAAAAGAATTTTGGTGATGAGAGTACAACCTTGGAGGGGTTGCAATTCAATTTCACTTCAATCAAAGCAGCAACAAATAACTTTTCACATGAAAACAAGATTGGCAAAGGTGGGTTTGGAGAAGTTTATAAGGGCATTCTATATGATGGACGACATATAGCTGTTAAGAGACTTTCAACAAGGTCCAAGCAAGGCTTAGTTGAGTTCAAGAATGAGATTTTATTGATAGCCAAATTACAACAAAGAAATCTTGTGACATTGATAGGATTTTGCCTAGAAAAGCAAGAAAAGATTCTTATTTATGAATATGTGCCAAATGGCAGCCTTGATTACTTTTTATTTGAATATGCCATGCTTGGACAATTTTCTGAGAAGTCAGATGTTTTTAGTTTTGGTGTCATGATTTTGGAGATCATTACTGGAAAAAGGAACATAAATTCTTATGAATCACACCATGTTACTGAAAGCCTCATAAGTTATGTTTGGAAACAATGGAAGAAGCAAACACCATTAAGCATATTGGATCCAAATATAAAAGGAAATTATTCTCAAAACGAAGTTATTAAATGCATTGAGATTGGTCTATTATGTGTTCAAGACAATCCAAATGTTAGACCAACAATGACAACGGTTATTTCATACCTTAATAGTTCTTCACTCGAATTTCCATCTCCACAAGAACCAACATTTTTCTTATACGGTAGAGTGGATCAAGAAATAACATCACAACAAGAATCAAGTTCTGTTAATGAGATGTCAATCAGTGAATTTTATCCTCGACAATAA 2583 0.4065 MLLLSKINKPIDSLMALFKLVFFFIFIIFNNFVTATAQDDLNYYCSGDKITPNSAFQLNLRTLLSYLSSNATGNREFYNTTVTGRNHSDTVYGMFMCWGDIPAHLCSQCVKNVTQTVILYSKHSGMAQAQISTGPDPDRLCSLYNQGIIRYDDECMVRYSNHSFFSTADLISPSASCSTISTASNSNLQAGARFEHVVSKIMNEVADEAANFSIGAKKYATKQARISDFQTLYCQVQCTPDLSPQDCRKCLNATISGLQQFCKGNSVGMQSTPSCNISNGPAPSGLIPVANHSDSKYSQDPGYLSHNCSSNETMMSTAFLSNLRILFSSLSSNATTKTGFFKTTVDGRNPLDTVHGLFMCRSDVSPAFCQLCILNATTRISLECPSSKEAIIWLDHCLLRYSNRSLSPTVETSPKFHEFDVANSSNPNLLQSFFTWTLAKILNKVVETETRGSTIKNYRTRSEKLNDQQTLYILAQCTPDLLDWDCSGCLQNIFQYEIPWSSLASPEGKVLYPSCVMMFGFSQFYRDGDEAEAFTQAGPPPTTKGAEAFRQASPPTKNERGKPQTIIVVVPIILSAILFSFCCCLLRKKAGKSSYKTFLKKNFGDESTTLEGLQFNFTSIKAATNNFSHENKIGKGGFGEVYKGILYDGRHIAVKRLSTRSKQGLVEFKNEILLIAKLQQRNLVTLIGFCLEKQEKILIYEYVPNGSLDYFLFEYAMLGQFSEKSDVFSFGVMILEIITGKRNINSYESHHVTESLISYVWKQWKKQTPLSILDPNIKGNYSQNEVIKCIEIGLLCVQDNPNVRPTMTTVISYLNSSSLEFPSPQEPTFFLYGRVDQEITSQQESSSVNEMSISEFYPRQ. 861
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07636 860 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 587 702 - -
Seca8g07636 860 Gene3D Phosphorylase Kinase; domain 1 589 702 - -
Seca8g07636 860 Gene3D - 417 524 IPR038408 -
Seca8g07636 860 Gene3D - 301 405 IPR038408 -
Seca8g07636 860 Gene3D - 176 279 IPR038408 -
Seca8g07636 860 Gene3D - 38 164 IPR038408 -
Seca8g07636 860 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 301 405 - -
Seca8g07636 860 ProSiteProfiles Gnk2-homologous domain profile. 38 164 IPR002902 -
Seca8g07636 860 MobiDBLite consensus disorder prediction 537 560 - -
Seca8g07636 860 ProSitePatterns Protein kinases ATP-binding region signature. 633 655 IPR017441 GO:0005524
Seca8g07636 860 Gene3D Transferase(Phosphotransferase) domain 1 713 819 - -
Seca8g07636 860 SUPERFAMILY Protein kinase-like (PK-like) 611 840 IPR011009 -
Seca8g07636 860 PANTHER CYSTEINE-RICH REPEAT SECRETORY PROTEIN 298 529 - -
Seca8g07636 860 MobiDBLite consensus disorder prediction 841 860 - -
Seca8g07636 860 Pfam Protein tyrosine and serine/threonine kinase 630 713 IPR001245 GO:0004672|GO:0006468
Seca8g07636 860 Pfam Protein tyrosine and serine/threonine kinase 716 813 IPR001245 GO:0004672|GO:0006468
Seca8g07636 860 Pfam Salt stress response/antifungal 45 161 IPR002902 -
Seca8g07636 860 Pfam Salt stress response/antifungal 177 276 IPR002902 -
Seca8g07636 860 Pfam Salt stress response/antifungal 432 519 IPR002902 -
Seca8g07636 860 Pfam Salt stress response/antifungal 308 403 IPR002902 -
Seca8g07636 860 ProSiteProfiles Gnk2-homologous domain profile. 415 524 IPR002902 -
Seca8g07636 860 ProSiteProfiles Gnk2-homologous domain profile. 301 406 IPR002902 -
Seca8g07636 860 ProSiteProfiles Gnk2-homologous domain profile. 176 284 IPR002902 -
Seca8g07636 860 ProSiteProfiles Protein kinase domain profile. 627 860 IPR000719 GO:0004672|GO:0005524|GO:0006468
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07636 Seca-Chr8 173657885 173668173 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07636 298 859 Receptor kinase-like Gene Family AT4G23280 31.877 1.63e-79 267
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca8g07636 Stress-antifung 7.5e-16 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07636 - - gmx:100785282 786.178