Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07635 ATGTTCGGTGCAGTTGGGAATGAAGTTACTGTTTTGGAATCCTTATGGTTTGATTTAGGCGAAATTGAATCTTCAACAAACAAGTTTGCTAGAGAAAACATGATTGGGAAAGGTGGATTTGGAGAAGTTTATAAGGGTGTACTTCCCAATGGACAAGAGATAGCTGTGAAGAGGCTCTTGGGAAGCTCTGGGCAAGGCGCAATAGAATTTAAAAATGAGGTTCTTGTTATAGCTCAACTTCAACACAGGAATCTAGTGAAATTACAAGGATTTTGCCTGGATGGGCAAGAAAAGATACTCATATATGAATATGTACCTAACAAGAGTCTTGATTATTTTTTATTTGATCCTCAAAAGAGAAGACAATTAAGTTGGTCTGAACGACACAAGATAATTGGAGGAATTGCTCGAGGAATTCTTTATCTCCATGAGGATTCTCGTCTTAAAATTATTCATCGTGATCTAAAACCCAGTAATGTTTTGTTAGATAGCAACATGAATCCAAAAATTTCAGATTTTGGAATAGCAAGAATTGTTGCTGCTGACAATATTGAAGAAAATACACATAGAATTGTTGGGACTTATGGTTATATGTCTCCAGAATATGCAATGCATGGTCACTTTTCCGTGAAATCTGACGTATTTAGTTTTGGAGTCATGGTTCTAGAGATTATTAGCGGAAAAAAGAAAGGTCCATCTTTTGAATCAAATAGTGTTGATGACATACGAAAATATGCTTGGATGAAATGGAGAAACCAAATGCCATTGGAACTATTGGATCCTCAATTGGAAGGATCATATTCTCAAAATGAAGTCATTAGATACATCCATATTAGTTTATTATGTGTACAAGAAGATCCCGATGATAGACCCACAATGGCAAAAGTTGTTTCTTTCCTCAATAATCCTTCAGTTGATTTGCCATTGCTTACTGAACAATCATTTTGCATGAATATAAAAATGGAGGACATTATGGGTAGAAAGGGATTGGACTCTACTAGTAATTCAACCTCTGCTAATGTCCATAATGATCCCAATGCTTACTATAACTGCACAAGGAACGACACTTTTTCTACCTCTACCGTTTACCGTTCCAACGTTAAAACTCTCCTGGATTGGCTCTCTTCCAATAGTACTAATAACGCCAGATACTACAACACCACAGTTACAAGCAAAACCACCGGGGACACTGTCTATGGTCTCTTCTATTGTAGAAGAGACATCCCCGACCCCAAAATCTGCGAATTGTGTGTAATAGAAGCAGCCAAACTCATACAAACTCTGTGCACCACGGCAACAGAAGCCATCATTTGGTACCATGTATGCCACGTGCGCTATTCAGATCGTCGTTTCTTTTCCACCATGGAAGAAAGTCCTAAAATTTCCTTTATGAACACTCGGGATTATGTGGATGAGGTTGGGCGCTTCAGCAATATTCTATGGGATTTGTTGAACGAATTGAAAAGTGAGGCAGCAAATGCTTCTGGTAAATGGGCTGACAAGTCGGTAAACATCACAGAAAGGCAAAAGCTATATGGCTCTGCTTCGTGCGTCCCGTACCTATCCAAGGAGGATTGTAGCTGGTGTCTTCATGATGCAATAGCAGAAATATCAGCTGTTTGCTGCAGAGGAAAATCTGGAGGCAGAGTAATATATCCGAGTTGCAGTGTTAGATATGAAATATATCCATTCTTCTTGCCAAATGCCACTTGGGTGCCGCCACTGCCCACGAGTCCTCTCCCATCGTCTCCAAAAATGGAAATGACACAAGGTACTGACATTCATGCAGGGAAAGGAAGAAAGAAGACACCAACAATAATTGTGATCGTTGTTCCAATTGTTGTTTCATTGGTGCTTTTAGCCTTGGGCTGCTGTTATTTTCTATATAGAAAAGGAAGAAAGAATCAACTCGGGAATGACATTACCACTTTGGAGTCCTTGCAATTTGAATTAACGAAAATAGAAGCTGCAACAAACAGGTTTGCCACAGAAAATAGGATAGGCAAAGGCGGATTTGGAGAAGTCTATAAGGGTATTCTTTCAGATGGACAAGAAATTGCTGTGAAGAGACTCACAAGAAGCTCTGGGCAAGATCCCCAGAAGCAAAAACTGTTACCTTGGTCTCAACGTCAGAAGATCATCAAAGGAATTGCCCGAGGAATTCTTTATCTCCATGAAGATTCTCGCCTCAAAATAATACACCGTGACCTGAAACCTAGCAATGTTTTGTTAGACAGTAATATGAATCCAAAAATTTCAGACTTTGGCATGGCCAGAATTGTTGCTGCAGATCAAATTGAAGAAAGTACAGGCAGAATTGTTGGGACATATGGTTATATGCCTCCAGAATATGCAATGCATGGATACTTCTCAGTTAAATCTGATGTGTTTAGTTTTGGAGTCATGGTTCTAGAGATTATTAGTGGAAAGAGGAAAAGTTGTTCATCTGAAGCAGAGTGTGTTGATGACATCCGGAGACATACTTGGACAAAATGGACAGAGCAAACGCCACTGGAACTACTGGACCCTAATATAGAAGGACCTTATTCCCCAGAAGAAGTCATCAAATGCATCCACATTGGTTTGTTATGTGTTCAGGAAGATCCAAACGATAGACCTACGATGGCAACAATTGTTTTCTACCTCAACAGCCCTTCAATCAATTTGCCATCCCCTCATGAACCACCGTATTTTAAGCGTAGTAGAACAGAAGAAAACAAAGGGACCAACAAGGAATTTGATAATACCAGTGATTCCATCAACGAAATTACTCTGACAAAATTCTTTCCTCGTTAA 2796 0.3941 MFGAVGNEVTVLESLWFDLGEIESSTNKFARENMIGKGGFGEVYKGVLPNGQEIAVKRLLGSSGQGAIEFKNEVLVIAQLQHRNLVKLQGFCLDGQEKILIYEYVPNKSLDYFLFDPQKRRQLSWSERHKIIGGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGIARIVAADNIEENTHRIVGTYGYMSPEYAMHGHFSVKSDVFSFGVMVLEIISGKKKGPSFESNSVDDIRKYAWMKWRNQMPLELLDPQLEGSYSQNEVIRYIHISLLCVQEDPDDRPTMAKVVSFLNNPSVDLPLLTEQSFCMNIKMEDIMGRKGLDSTSNSTSANVHNDPNAYYNCTRNDTFSTSTVYRSNVKTLLDWLSSNSTNNARYYNTTVTSKTTGDTVYGLFYCRRDIPDPKICELCVIEAAKLIQTLCTTATEAIIWYHVCHVRYSDRRFFSTMEESPKISFMNTRDYVDEVGRFSNILWDLLNELKSEAANASGKWADKSVNITERQKLYGSASCVPYLSKEDCSWCLHDAIAEISAVCCRGKSGGRVIYPSCSVRYEIYPFFLPNATWVPPLPTSPLPSSPKMEMTQGTDIHAGKGRKKTPTIIVIVVPIVVSLVLLALGCCYFLYRKGRKNQLGNDITTLESLQFELTKIEAATNRFATENRIGKGGFGEVYKGILSDGQEIAVKRLTRSSGQDPQKQKLLPWSQRQKIIKGIARGILYLHEDSRLKIIHRDLKPSNVLLDSNMNPKISDFGMARIVAADQIEESTGRIVGTYGYMPPEYAMHGYFSVKSDVFSFGVMVLEIISGKRKSCSSEAECVDDIRRHTWTKWTEQTPLELLDPNIEGPYSPEEVIKCIHIGLLCVQEDPNDRPTMATIVFYLNSPSINLPSPHEPPYFKRSRTEENKGTNKEFDNTSDSINEITLTKFFPR. 932
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07635 931 ProSiteProfiles Protein kinase domain profile. 29 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07635 931 FunFam Cysteine-rich RLK (RECEPTOR-like protein kinase) 23 2 104 - -
Seca8g07635 931 Gene3D Transferase(Phosphotransferase) domain 1 644 697 - -
Seca8g07635 931 Pfam Salt stress response/antifungal 351 448 IPR002902 -
Seca8g07635 931 Pfam Salt stress response/antifungal 471 561 IPR002902 -
Seca8g07635 931 Pfam Protein tyrosine and serine/threonine kinase 32 300 IPR001245 GO:0004672|GO:0006468
Seca8g07635 931 CDD STKc_IRAK 35 302 - -
Seca8g07635 931 MobiDBLite consensus disorder prediction 892 916 - -
Seca8g07635 931 MobiDBLite consensus disorder prediction 897 912 - -
Seca8g07635 931 SUPERFAMILY Protein kinase-like (PK-like) 647 902 IPR011009 -
Seca8g07635 931 Gene3D Phosphorylase Kinase; domain 1 6 104 - -
Seca8g07635 931 Gene3D Transferase(Phosphotransferase) domain 1 698 889 - -
Seca8g07635 931 ProSiteProfiles Gnk2-homologous domain profile. 457 564 IPR002902 -
Seca8g07635 931 SMART serkin_6 29 305 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07635 931 SMART serkin_6 661 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07635 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 732 744 IPR008271 GO:0004672|GO:0006468
Seca8g07635 931 Gene3D Transferase(Phosphotransferase) domain 1 105 307 - -
Seca8g07635 931 FunFam Cysteine-rich receptor-like protein kinase 10 460 564 - -
Seca8g07635 931 FunFam cysteine-rich receptor-like protein kinase 10 105 307 - -
Seca8g07635 931 Pfam Protein kinase domain 702 879 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07635 931 PANTHER PROMASTIGOTE SURFACE ANTIGEN PROTEIN PSA 487 698 - -
Seca8g07635 931 ProSitePatterns Protein kinases ATP-binding region signature. 667 689 IPR017441 GO:0005524
Seca8g07635 931 SUPERFAMILY Protein kinase-like (PK-like) 14 325 IPR011009 -
Seca8g07635 931 ProSitePatterns Serine/Threonine protein kinases active-site signature. 150 162 IPR008271 GO:0004672|GO:0006468
Seca8g07635 931 ProSiteProfiles Protein kinase domain profile. 614 887 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07635 931 ProSitePatterns Protein kinases ATP-binding region signature. 35 57 IPR017441 GO:0005524
Seca8g07635 931 FunFam cysteine-rich receptor-like protein kinase 10 693 889 - -
Seca8g07635 931 ProSiteProfiles Gnk2-homologous domain profile. 345 451 IPR002902 -
Seca8g07635 931 Gene3D - 460 564 IPR038408 -
Seca8g07635 931 Gene3D - 344 451 IPR038408 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07635 Seca-Chr8 173610389 173622698 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07635 341 931 Receptor kinase-like Gene Family AT4G05200 39.216 5.73e-147 450
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_DLSV Seca8g07635 PK_Tyr_Ser-Thr 2.3e-46 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07635 - - cave:132170060 881.708