Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07619 ATGTCAGGAATGACAGCGAAAATGATGGGAAAGTCTGTGACAGCGCTCTCTTACAATCATATGCCTTCGTGCACGCTTGATCTTGGGGGTGGTACCCACGGAGCAGAGTCATCAATAGGGGAAATGTATGGCAGTGGTATGATGATGTCACTCCTTGTTCCTACGGAAGCTGAGAAAATCTTGATTGTGGACCTTGCTGTTTCCGGAATGGAGGAATTGATAAGCTTGGCTGCCTCTAGTGAGCCTTTATGGGTCGTGAGCAACCTTGGTTTTGAAATTCTCAATGAAAGTGAATACTCAAGGACTTTCCATGGGGGAACGAGTCCAAAGCCTTTGGGGTATAAAACGGAAGCTTCAAGGGATTCTGTGGTGGTTATCATGAATCATATGAACCTCGTTGAGATCCTTATGAATGTGGTCAGTTTTATCATTATTAATTAA 441 0.4399 MSGMTAKMMGKSVTALSYNHMPSCTLDLGGGTHGAESSIGEMYGSGMMMSLLVPTEAEKILIVDLAVSGMEELISLAASSEPLWVVSNLGFEILNESEYSRTFHGGTSPKPLGYKTEASRDSVVVIMNHMNLVEILMNVVSFIIIN. 147
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07619 146 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 2 141 IPR042160 -
Seca8g07619 146 Pfam START domain 67 139 IPR002913 GO:0008289
Seca8g07619 146 ProSiteProfiles START domain profile. 55 84 IPR002913 GO:0008289
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07619 Seca-Chr8 173465045 173465485 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07619 1 145 Homeobox Transcription Factor Family AT4G04890 48.344 1.89e-38 135
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07619 K09338 - jre:108990742 152.14