Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07618 ATGTTGAAGCTGGCGGAGAGAATGATATTTAACTTCTGTACTTGTGTTGGTTCTTCTACATCACATCACCCAACTGGTTGTGATGATGTAAGGATCATGACCAGAAAGAACAACGGTGAACCTGGCAGACCTGCTGGTATTGTTCTCAGTGCTGCAACCTCTTTCTGGCTTCCAATTCAGCCAAAGAAGTGTTTTGAGTTCCTTCGAAATGAAAACTCAAGGCACGAGTGGGATATTCTCTCCAACGGGATTGTAGTTCAAGAACTGGCACACATAACAAATGGTCGTCATCCTGGAAATTGTTTATCTTTGTTTCGAGTCAATGGTGCAAGTGAGAACCAAAGTAATATGCTTATGCTTCAAGAGAGCTTCAGCGATCCTACAGGGTCGTACGTGGTTTATGCTCCAACTGATCTTATTGCTGTGAATGTTGTGCTGAGTGGGGGTGATCCAGATTATGTCGCCCTGCTACCCTCAGGCTTTGTTATTCTTCCTGATGGGCCTATTGTTGATATTGGAACTGGAACAGTTGCATTTCAGATATTGGTTGATACACTTCCAACAGCCAAACTATCTCTTGGTTCTGTCACCACTGGTAGCACTTTGTTGAAGTGCACAGTTGAACGGATAAAAGCTGCAGTTAAGTTCACACAACAACATAACCGTATAGCCGTCAAATAG 681 0.4332 MLKLAERMIFNFCTCVGSSTSHHPTGCDDVRIMTRKNNGEPGRPAGIVLSAATSFWLPIQPKKCFEFLRNENSRHEWDILSNGIVVQELAHITNGRHPGNCLSLFRVNGASENQSNMLMLQESFSDPTGSYVVYAPTDLIAVNVVLSGGDPDYVALLPSGFVILPDGPIVDIGTGTVAFQILVDTLPTAKLSLGSVTTGSTLLKCTVERIKAAVKFTQQHNRIAVK. 227
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07618 226 PANTHER HOMEOBOX-LEUCINE ZIPPER PROTEIN MERISTEM L1 1 214 IPR042160 -
Seca8g07618 226 SUPERFAMILY Bet v1-like 1 168 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07618 Seca-Chr8 173463884 173464758 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07618 1 214 Homeobox Transcription Factor Family AT4G04890 64.435 8.01e-101 306
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07618 K09338 - gmx:100815499 317.775