Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07614 ATGCAACTTGATCTGGAATCCTTGTCAGAAGCTACTTCTGGTGCCATTGGATCCCTTGTGAGCACCACTGTCTTGTACCCACTTGATACTTGCAAGACCAAATATCAAGCTGAAGTTCAAGCTCACAATCAGCGAAAATACAGGAGGATTTCTGATGTTTTATGGGAAGCAATTTCTACCCGTCAGGTTCTTTCATTGTACCAAGGCCTTGGGACAAAAAACGTCCAGTCCTTCGTTTCATCATTTATTTATTTCTACGGATACAGCTACTTTAAGAAGCTATATTTGAAAAAAACTGGAAAGAAGAACATTGGAACAGCAGCAAACTTGATTGCTGCTACTGCATCTGGGGTCTGTACAATACTAATAACACAGGCAAGTCAAACTTGCACGCAATCTTCTTTAACATCTGCTTCTATTTTTCAGCCCTTAGATACAGCATCCTCACGGATGCAGACAAGTGAATTTGGAAAATCCAAGGGATTCTGGAAGACCCTTTCAGAAGGTACATGGAGTGAGGCATTTGACGGTCTTGGAATATCTATTCTTTTAACAACAAACCCATCTATTCAGTATACTGCATTCGATCAGCTGAAACAGAGACTACTAAAGGGCAAGATGAGCAAGAAAACAGATACAAACTCATCCCCAGAAGCACTTTCTGCATTTTCTGCTTTCATGCTGGGTGCAGTTTCAAAATGTGCTGCTACATGCTTGACATACCCAGCTATCAGATGTAAGGTCATGATTCAGGCTGCTGATTCAGATGATGGTAAGAGTACAGAAGCTGAGAGGAAGGCACAGAGGACAATCTCTGGAGCACTCTATACTATTTGGAGAAGAGAAGGCCTTTTGGGATTTTTCAAAGGATTGCAGGCACAGATATTGAAAACTGTTCTGAGCTCTGCATTACTTCTGATGGTGAAGGAGAAGATCACAAAGTCCACATGGATTCTGATGCTCATGATCGGAAGATACCTATCTGTCAAACCCCCCAAATTGAAAGCAGCTTGA 1014 0.4172 MQLDLESLSEATSGAIGSLVSTTVLYPLDTCKTKYQAEVQAHNQRKYRRISDVLWEAISTRQVLSLYQGLGTKNVQSFVSSFIYFYGYSYFKKLYLKKTGKKNIGTAANLIAATASGVCTILITQASQTCTQSSLTSASIFQPLDTASSRMQTSEFGKSKGFWKTLSEGTWSEAFDGLGISILLTTNPSIQYTAFDQLKQRLLKGKMSKKTDTNSSPEALSAFSAFMLGAVSKCAATCLTYPAIRCKVMIQAADSDDGKSTEAERKAQRTISGALYTIWRREGLLGFFKGLQAQILKTVLSSALLLMVKEKITKSTWILMLMIGRYLSVKPPKLKAA. 338
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07614 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 5 94 IPR018108 -
Seca8g07614 337 Pfam Mitochondrial carrier protein 7 98 IPR018108 -
Seca8g07614 337 Pfam Mitochondrial carrier protein 220 314 IPR018108 -
Seca8g07614 337 Gene3D Mitochondrial carrier domain 133 316 IPR023395 -
Seca8g07614 337 ProSiteProfiles Solute carrier (Solcar) repeat profile. 220 315 IPR018108 -
Seca8g07614 337 Gene3D Mitochondrial carrier domain 2 132 IPR023395 -
Seca8g07614 337 SUPERFAMILY Mitochondrial carrier 8 311 IPR023395 -
Seca8g07614 337 PANTHER PEROXISOMAL ADENINE NUCLEOTIDE TRANSPORTER 1 134 336 IPR045900 GO:0005347|GO:0006635|GO:0015217
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07614 Seca-Chr8 173426877 173431679 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07614 23 333 Chloroplast and Mitochondria Gene Families AT1G25380 25.938 5.81e-11 61.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07614 - - gmx:100795330 541.962
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07614 8 173426877 173431679 Seca8g07614 8 173426877 173431679 ECH