Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07612 ATGGCCACAGGAAAGCCTCCGTGGAGTCAACAGTATCCCCAGGAGGTTTCGGCTCTTTTCTACATTGGGACAACTAAATCTCATCCACCCATACCTGAGCATCTGTCTGATGAGGCAAAGGACTTTTTGCTGAAATGCTTCCATAGGGAACCAAATTTAAGACCTTCTGCATCAGACTTGTTACTGCATCCATTCATCACCTGTGAGTATCAGGATTCTCGTTCAATATTACGTAGTACAATCAGGGACTCTTGCAATCAGATGGCAACATATGGGATGAACTCTAGAAACTTTTTGGATTCTGTCCAGGGATCAACCTGCACGGGCCTAAAGGATGTCTGTCGGATAGATAGTGTAAGGTTCTCGAGTGTATATCATGCAAATCTTCCAAGAGCAGGTTACTACCAGGGAGCAGACAACTATGATGATGACATGTGTCAGATAGATGATAAAGATGATTTTTTGGTTGCTTCATCAGTAAAATCTAAATCACTATTTGCTGCTGATGATATAAAGAGTTTCAATCCTATGTGCGAACCTGTGGATGACTGGCCTTGCAAGTTTGATGAAACTCAAAATTTGGAGAAAAGTAGAGTGGACTTGTCTCCAGATCAAACTATTAGGAAAACCATGAGGAGTCATGAACCATCTAGTAAAGTGGAGAATGATTTCTCATTCTCAAGCGAGCCTCTTGGAGTTGAAGATGATGATGAAGTCACTGAGTCCAAAATAAGAGCTTTCCTGGATGATAAGGCCTTTGAACTGAAGAAGCTCCAAACACCACTTTATGAAGAATTCTTTAGCATATCAAATGCAGCAATTGCTCCTGCTCCTGCACCTGTTGCAATTGCACAGAGTAAAGTCATTTCGGATGTGTCAACTGTAACATCAAAAGGCAGGTCTCCTGGTCAAGCTAGAAGACGGTTCTCAATGGCTGGGAGTGCCAGTGTAGCAAGCCCTGGGAGCCATAGCAAATATCGATCAAAGCTTAGTGGTGCTTACAGTCGGCCTTTGCAGGAAATTCAGTCATCTGAGCTTAATGAATCAAAGGAGACTCTTCATGATGCTGAGCTGGGGACATTTAGTGTTAGCTCAAGCTTCTCTGAGAGACAGAGAAAATGGAAAGAAGAACTTGTTGAAGAGCTTCAGTGGAAGCGAGGCAAGTTTTATGTTTTCTCTGACAATTAG 1188 0.4259 MATGKPPWSQQYPQEVSALFYIGTTKSHPPIPEHLSDEAKDFLLKCFHREPNLRPSASDLLLHPFITCEYQDSRSILRSTIRDSCNQMATYGMNSRNFLDSVQGSTCTGLKDVCRIDSVRFSSVYHANLPRAGYYQGADNYDDDMCQIDDKDDFLVASSVKSKSLFAADDIKSFNPMCEPVDDWPCKFDETQNLEKSRVDLSPDQTIRKTMRSHEPSSKVENDFSFSSEPLGVEDDDEVTESKIRAFLDDKAFELKKLQTPLYEEFFSISNAAIAPAPAPVAIAQSKVISDVSTVTSKGRSPGQARRRFSMAGSASVASPGSHSKYRSKLSGAYSRPLQEIQSSELNESKETLHDAELGTFSVSSSFSERQRKWKEELVEELQWKRGKFYVFSDN. 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07612 395 Gene3D Transferase(Phosphotransferase) domain 1 1 107 - -
Seca8g07612 395 MobiDBLite consensus disorder prediction 211 235 - -
Seca8g07612 395 MobiDBLite consensus disorder prediction 292 333 - -
Seca8g07612 395 SUPERFAMILY Protein kinase-like (PK-like) 1 88 IPR011009 -
Seca8g07612 395 ProSiteProfiles Protein kinase domain profile. 1 66 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07612 395 PANTHER CCR4-NOT TRANSCRIPTIONAL COMPLEX SUBUNIT CAF120-RELATED 1 184 - -
Seca8g07612 395 MobiDBLite consensus disorder prediction 315 333 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07612 Seca-Chr8 173412699 173416095 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07612 1 374 MAP Kinase Kinase Kinase AT3G06030 39.788 1.25e-72 237
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07612 - K20606 ccaj:109794823 560.836