Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07568 ATGAATGGTGCTTCAAATGTTGAGGCAGAGTACTCTGAGTTTGTGGAAGTTGATCCTACGGGAAGATATGGAAGATACAATGAAATTCTTGGCAAAGGAGCTTCCAAGTCAGTCTACAAAGCATTTGATGAGTATGAAGGGATAGAAGTAGCATGGAATCAAGTAAAGCTTTACGATTTTTTGCAGAATCCTGAAGACCTTGAGAGGTTATACAGTGAAATTCATCTCCTCAAGACATTGAAACACAAGAATATCATGAAGTTCTATACTTCTTGGGTTGATACTACAAACAGGCACATTAACTTTGTCACTGAGATGTTTACCTCTGGAACTCTAAGACAGTACAGGCTTAAACACAGAAGGGTAAACATCAGAGCTGTTAAACATTGGTGCAGGCAGATTTTGGAAGGGCTCCTATATCTTCACAATCATGACCCTCCTGTGATCCATAGAGATCTCAAGTGTGATAACATTTTCATCAATGGCAACCAAGGGGAAGTCAAAATTGGTGATCTTGGCCTTGCTGCAATTCTCCGCAAATCTAATGCTGTTCGCTGTGTTGGCACACCTGAATTTATGGCTCCAGAAGTGTACGAAGAGGATTACAATGAATTGGTTGACATATACTCTTTTGGAATGTGTGTCTTGGAGATGGTAACCTTTGAATATCCTTATAGTGAATGCAACCATCCTGCTCAAATTTACAAGAAAGTTGTATCTGGGAAGAAGCCAGAAGCTCTTTACAAAGTAAACAATCCTGAGGTTAGACAGTTTGTAGAGAAATGTTTAGCAACTGTGTCCCTCAGACTTTCAGCCAAGGAACTCTTGGAGGACCCTTTTCTCCAAATTGATGATTATGGATCTGACTTAAATGCAGTACAGTATCAAAGAGATTGCTATGACTATGAAGTAACCCCAACAATTAGACATCCTTTGAATGAATTTCATGGCATTAACAACACCTTAATGAGTGGGTATACTGATAATCTTAGTGGTTATGAACCTGTATCTGAATTGGATTATCTTCAAGATGATTTTGAAAGGAGTGAAATTGATCTCTTTGATTGCGAAGAGGATGATAATTTGGCTATAGTTGACACCACAATCAAAGGTAGGAGAAGAGAAGATGATGGCATCTTTCTGAGAATCAGAATAGCAGATAAGGAAGGTCGAGTTCGAAACATCTACTTCCCATTTGACACAGATAATGATACTGCATTGAGCGTTGCAAATGAAATGGTAGCTGAGCTTGACATAACGGATCAAGATGTAACAAAATTAGCAAATATGATAGATAATGAAATTGCAACTTTGGTCCCAGGATGGAAAACAGGAGAGGAAATTTCAGACTGTTCAAGTGCAAGTTTCTGCCTCAATTGTGCTACAAACAGTTCCTTATTTGATTATGCATCATCAAACAATCCATGTGCCAATAACCTTCAATTTCTTGGTTGTTCTAAAAACGGATGTGCTGCAGTTCATGGTCGATTTGAGGAGATCACATACCAAGTTGAAGGGTCTGGAAATGAAGGTGCACCACCTGCTGCATCAAGCCAATCCAATGGCATTCATTATACTGATATATGGGCTCAACGAGATGAACCAGAGTTATGTCCTGAAGGGTTAAAAGACATACATTGTGACCAAGCTCATGAGGCATCAAACCTATCAACCATCAAGGAGGAGGAGGAGGAGAGAGCTATCAATGTGGATGACCAACAAAGTGATCTTAATGCTAGAAATAGAAAGCCTCCTTCTGGCCCTACATCAGAACATGTTCTCTTGGACTATGAAAATGAAATTAGGCAAGAACTAAGATGGCTCAAAGCAAAATACCAAATGCAGTTAAGAGAGCTTAGAGACCACCAACTAGGTGGTAAGCCAAATTTTACTTGCATATCTCCTGACAATGAAAAATTAGAGCATGGGAAAGATGGAGTTCTGAGGCTGTCAGCTAAATCCCACTTGAAGATACAGAACAATAAACCATTATTAAGATCTTTGGCTTCTAGGAAGCATTTTCCTATTGATGCTGAGAAATGCACTACTTTGGCTAATCAAATTATTCAAAATGTTGGTGACACAAATCAGCCTAACAGTCCTGAGCAAATGTTCACAGCCAAGGATTTCTATGCAGGAGCTTTACTTCCTCACTCGCTTCACAGGGCAACCTCACTTCCTGTTGATGCAGTAGATGTCTAG 2202 0.3951 MNGASNVEAEYSEFVEVDPTGRYGRYNEILGKGASKSVYKAFDEYEGIEVAWNQVKLYDFLQNPEDLERLYSEIHLLKTLKHKNIMKFYTSWVDTTNRHINFVTEMFTSGTLRQYRLKHRRVNIRAVKHWCRQILEGLLYLHNHDPPVIHRDLKCDNIFINGNQGEVKIGDLGLAAILRKSNAVRCVGTPEFMAPEVYEEDYNELVDIYSFGMCVLEMVTFEYPYSECNHPAQIYKKVVSGKKPEALYKVNNPEVRQFVEKCLATVSLRLSAKELLEDPFLQIDDYGSDLNAVQYQRDCYDYEVTPTIRHPLNEFHGINNTLMSGYTDNLSGYEPVSELDYLQDDFERSEIDLFDCEEDDNLAIVDTTIKGRRREDDGIFLRIRIADKEGRVRNIYFPFDTDNDTALSVANEMVAELDITDQDVTKLANMIDNEIATLVPGWKTGEEISDCSSASFCLNCATNSSLFDYASSNNPCANNLQFLGCSKNGCAAVHGRFEEITYQVEGSGNEGAPPAASSQSNGIHYTDIWAQRDEPELCPEGLKDIHCDQAHEASNLSTIKEEEEERAINVDDQQSDLNARNRKPPSGPTSEHVLLDYENEIRQELRWLKAKYQMQLRELRDHQLGGKPNFTCISPDNEKLEHGKDGVLRLSAKSHLKIQNNKPLLRSLASRKHFPIDAEKCTTLANQIIQNVGDTNQPNSPEQMFTAKDFYAGALLPHSLHRATSLPVDAVDV. 734
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07568 733 FunFam Probable serine/threonine-protein kinase WNK1 9 105 - -
Seca8g07568 733 MobiDBLite consensus disorder prediction 554 571 - -
Seca8g07568 733 FunFam probable serine/threonine-protein kinase WNK9 107 286 - -
Seca8g07568 733 ProSiteProfiles Protein kinase domain profile. 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07568 733 SMART serkin_6 24 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07568 733 PANTHER SERINE/THREONINE-PROTEIN KINASE WNK WITH NO LYSINE -RELATED 10 628 - -
Seca8g07568 733 Gene3D - 358 442 - -
Seca8g07568 733 Gene3D Phosphorylase Kinase; domain 1 7 105 - -
Seca8g07568 733 Pfam Protein kinase domain 27 281 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07568 733 CDD STKc_WNK 22 281 - -
Seca8g07568 733 ProSitePatterns Serine/Threonine protein kinases active-site signature. 148 160 IPR008271 GO:0004672|GO:0006468
Seca8g07568 733 SUPERFAMILY Protein kinase-like (PK-like) 27 282 IPR011009 -
Seca8g07568 733 Gene3D Transferase(Phosphotransferase) domain 1 107 286 - -
Seca8g07568 733 MobiDBLite consensus disorder prediction 554 591 - -
Seca8g07568 733 Pfam Oxidative-stress-responsive kinase 1 C-terminal domain 381 435 IPR024678 GO:0004674|GO:0005524
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07568 Seca-Chr8 172896722 172900799 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07568 1 635 MAP Kinase Kinase Kinase AT3G22420 51.546 0.0 625
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK WNK_NRBP Seca8g07568 Pkinase 3.7e-50 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07568 K08867 - gmx:100804179 1199.88
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Seca8g07568 8 172896722 172900799 Seca8g07568 8 172896722 172900799 ECH