Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07567 ATGAGCATTGGGCCTAAGAAGATTAGTTATTATGAATTGGCAACTGCAACAAATAACTTTGAAGAGAAACAGAAGCTTGGTCAAGGTGGTTTTGGTGGTGTTTACAAGGTTTATTTTAAGGACTCAAACTCCTTTGCTGCTATAAAGAAGATATCAGCAGATTCAAGACAGGGTATAAAGCAATACGCAGAAGAAGTTAAGATCATTAGCCAATTGAGGCATAGGAATTTGGTGAAACTCGCTGGTTGGTGCCACAAGAAGAATGAATTCCTCCTGATATACGAATACATGCAAAATGGAAGTAGATTCTCATCTTTTTGGTGGAGAAAGTGTCTTGTCATGGCAGGTGAGGTACAAGATAGCTATGGGCTTGGCCTCAGCATTACTTTATTTGCAGGAAGAGTGGGAAAAATGTGTGCTTCATAG 426 0.3944 MSIGPKKISYYELATATNNFEEKQKLGQGGFGGVYKVYFKDSNSFAAIKKISADSRQGIKQYAEEVKIISQLRHRNLVKLAGWCHKKNEFLLIYEYMQNGSRFSSFWWRKCLVMAGEVQDSYGLGLSITLFAGRVGKMCAS. 142
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07567 141 PANTHER - 5 101 - -
Seca8g07567 141 ProSiteProfiles Protein kinase domain profile. 20 141 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07567 141 SUPERFAMILY Protein kinase-like (PK-like) 5 101 IPR011009 -
Seca8g07567 141 Gene3D Phosphorylase Kinase; domain 1 5 96 - -
Seca8g07567 141 Pfam Protein kinase domain 20 104 IPR000719 GO:0004672|GO:0005524|GO:0006468
Seca8g07567 141 ProSitePatterns Protein kinases ATP-binding region signature. 26 50 IPR017441 GO:0005524
Seca8g07567 141 FunFam L-type lectin-domain containing receptor kinase IX.1 5 96 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07567 Seca-Chr8 172887851 172888276 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07567 4 131 Receptor kinase-like Gene Family AT5G65600 50.781 3.73e-39 137
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
PK RLK-Pelle_L-LEC Seca8g07567 Pkinase 8.7e-19 CL0016
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07567 - - lja:Lj4g3v0408370.1 183.341