Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07553 ATGCCCAACCTGTTCTCTAAACATCTTCACCTCTGTTTCTTCAAGCTGAAATACCCCACCATGCTATCCCAACCTGACCCACAACACCATCACAATCACACCCCATCACCACCACCTTCCACCGACGACTACTTCTCCTCCTCCTCCTCCTCCGCCTCCGACTCCATGCCAGACTTCGCCTCCATCTTCGCCTCCCAGCGCTTCTTCTTCTCCTCCCCTGGCACCTCCAATTCCATCATAGAATCCCCTGACACTCGCCCTCGCCCCTGCAACACCAACACGCTCATACCATTACCAAGAGGAGGTGTCAGGGTCCCCAAATACTCCATCAACCCCTACGTGGATTTCCTCCATTCAATGCAGGAAATGATCCATTCCCGGCATCAAGTGGAAAATGACTGGGATTATCTTCACGAGCTTCTCTTATGCTATCTCGCTCTCAATCCCACACACACTCACAAGCACATTGTTCGTGCTTTCACTCATCTTGTTGTGGACCTTTTGTCATCCTCTTCTTCCTCCTCATCATCGCCATCATCGGAGATCAAATTAACTACCCCTTGCCGCATGCATAACAATCAACGACAGAGTAGTTACTCAGGGAGGTTGGTGTAA 615 0.5057 MPNLFSKHLHLCFFKLKYPTMLSQPDPQHHHNHTPSPPPSTDDYFSSSSSSASDSMPDFASIFASQRFFFSSPGTSNSIIESPDTRPRPCNTNTLIPLPRGGVRVPKYSINPYVDFLHSMQEMIHSRHQVENDWDYLHELLLCYLALNPTHTHKHIVRAFTHLVVDLLSSSSSSSSSPSSEIKLTTPCRMHNNQRQSSYSGRLV. 205
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07553 204 PANTHER TRANSCRIPTION REPRESSOR OFP7-RELATED 36 170 IPR038933 GO:0045892
Seca8g07553 204 Pfam Transcriptional repressor, ovate 109 167 IPR006458 -
Seca8g07553 204 NCBIfam uncharacterized plant-specific domain TIGR01568 105 168 IPR006458 -
Seca8g07553 204 MobiDBLite consensus disorder prediction 25 50 - -
Seca8g07553 204 MobiDBLite consensus disorder prediction 24 50 - -
Seca8g07553 204 ProSiteProfiles OVATE domain profile. 105 166 IPR006458 -
Seca8g07553 204 MobiDBLite consensus disorder prediction 170 204 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07553 Seca-Chr8 172755147 172755761 Wgd
       

Transcription factors information

Select Regulatory Factors Family Gene Hmm_acc Hmm_name E_value Clan
TF OFP Seca8g07553 Ovate 8.3e-22 No_clan
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07553 - - mtr:25485200 206.068