Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07515 ATGGGGAAGACAGGCAAGTGGCTTAGAAACTTCTTGACAGGGAAGAAAGACAAGGAAAAGGAGAAGGAAAAATCTCCAAACAACCTGAATTTTTCAAATGGAACAGAAAATCCAACTACTCCAAATTCAACAACCCCAAAGGAGAAAAAGAGATGGAGTTTTAGAAGATCATCAGCCACAGCCACACCAACAGCTTCCAAGGAATTGAATTTTGGAGAATCAAATGGCACTGCTTCACAGACAATGCAAACTGCCACTGATATTCCAAATGAGCAGAGAAAGCATGCCATGGCTGTGGCTGCTGCCACAGCAGCAGCAGCTGATGCAGCAGTGGCAGCTGCACAGGCTGCAGCTGCTGTGATCCGCTTGACTTCTGGTTCCAATGAAACATCTAAAAGTATTGAAGAGGCTGCTGCCATTAAAATCCAATCTGTATTTCGGTCTCACTTGGCAAGAAAAGCATTGTGTGCTCTAAGAGGATTAGTGAAGTTGCAGGCACTAGTAAGGGGTCACCTTGTGAGAAAACAGGCCAAGGAAACACTGAGATGCATGCAGGCTTTGGTGACAGCACAAGCCAGAGCTCGTGCTCAGAGGATCCGAATGGGGTCAGAAGGAAAGTCTAGTCAAAACAACTTAACTCACGGATATGCTACAGAGAACGATTTATTCAAGCACATATATAATGAAATGGACAGAAGCTTGGAAGACAATATCAAGATTGTGGAGATGGATGTTTGTGAATCAAAAGGTAACTCTAGAAGCAGAAGCAGCAGTACATATCATCATGGACATCAGGAACAGTCTGACCATAGATTTTCCTCACATTATTCAACAAATGGTTCGCACTCAAAGGAAGAAAACTACAACAAGGTATCACCAGCTCCATCAGCTTTGACAGAGTTGAGCCCAAGAGCCTGCAGTGGCCATTTTGAGGACTGCTTCAGTACAGCACAGAGCAGCCCTCATTACTACTCTGCTGTGTCTAGAGCAGACGATTCAAAGCATCCTTTTGCTTTCCCTAGGCCAGCTTATGCAGAATCTATGTCCTATGACTACCCTTTGTTCCCAAATTACATGGCTAACACAGAATCATCAAGGGCCAAAGTCAGATCACATAGTGCACCAAAACAAAGACCGGATTCATTTGAGAGGCAACCAAGCAGGCGAAGAGTTTCAGTGGAAGGAAGAAATGTCCCAAGGCCAGTGAGGATGCAGAGGTCATCTTCACATGTGGGTGCCACTGCCCATAACTACCAATATCCATGGTCAATCAAGCTTGACAGATCCACAGTTTCACTCAAAGACAGTGAGTGTGGTTCTACAAGTACAGTGCTCACAAACACTAATTACTGCAGATCTCTTGTTGCATATGACCCAAATGGAGATAGGTACTGA 1395 0.4452 MGKTGKWLRNFLTGKKDKEKEKEKSPNNLNFSNGTENPTTPNSTTPKEKKRWSFRRSSATATPTASKELNFGESNGTASQTMQTATDIPNEQRKHAMAVAAATAAAADAAVAAAQAAAAVIRLTSGSNETSKSIEEAAAIKIQSVFRSHLARKALCALRGLVKLQALVRGHLVRKQAKETLRCMQALVTAQARARAQRIRMGSEGKSSQNNLTHGYATENDLFKHIYNEMDRSLEDNIKIVEMDVCESKGNSRSRSSSTYHHGHQEQSDHRFSSHYSTNGSHSKEENYNKVSPAPSALTELSPRACSGHFEDCFSTAQSSPHYYSAVSRADDSKHPFAFPRPAYAESMSYDYPLFPNYMANTESSRAKVRSHSAPKQRPDSFERQPSRRRVSVEGRNVPRPVRMQRSSSHVGATAHNYQYPWSIKLDRSTVSLKDSECGSTSTVLTNTNYCRSLVAYDPNGDRY. 465
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07515 464 Gene3D - 134 186 - -
Seca8g07515 464 PANTHER IQ-DOMAIN 5-RELATED 1 394 - -
Seca8g07515 464 MobiDBLite consensus disorder prediction 366 411 - -
Seca8g07515 464 MobiDBLite consensus disorder prediction 27 47 - -
Seca8g07515 464 Pfam IQ calmodulin-binding motif 137 155 IPR000048 GO:0005515
Seca8g07515 464 Pfam IQ calmodulin-binding motif 162 178 IPR000048 GO:0005515
Seca8g07515 464 MobiDBLite consensus disorder prediction 369 396 - -
Seca8g07515 464 ProSiteProfiles IQ motif profile. 159 186 IPR000048 GO:0005515
Seca8g07515 464 MobiDBLite consensus disorder prediction 10 26 - -
Seca8g07515 464 SMART iq_5 157 178 IPR000048 GO:0005515
Seca8g07515 464 SMART iq_5 134 156 IPR000048 GO:0005515
Seca8g07515 464 MobiDBLite consensus disorder prediction 56 80 - -
Seca8g07515 464 MobiDBLite consensus disorder prediction 1 80 - -
Seca8g07515 464 MobiDBLite consensus disorder prediction 249 296 - -
Seca8g07515 464 MobiDBLite consensus disorder prediction 272 296 - -
Seca8g07515 464 Pfam Protein of unknown function (DUF4005) 340 395 IPR025064 -
Seca8g07515 464 ProSiteProfiles IQ motif profile. 135 163 IPR000048 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07515 Seca-Chr8 172306215 172311342 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07515 1 452 IQD Protein Family AT4G14750 45.416 7.61e-103 313
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07515 - - gmx:100817667 696.427