Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Seca8g07514 | ATGGCTGGTAGACTACCTGGTGTTGGGTTACCACCCAGGAAGAGATCAGAACATCACCATAATAATAGATATGAATACCATGCTACCCACCGAGACGCCTACCTAAGGGATAAATATTCATTGGAGTCACCATGGTTAGATGAAACTGCTCTCAAGGCCAGACAACGCCTGCAGAAGAAGCTTGCTCACTTCTTTTCTTATTCCAGGTCAAGTGAGAGCAGCAATCCGATAAAAGAAGGAAAAGTGAGTGAAATTAGGAGGTTGGAGAAGAAGAAGGAATCGGGGTTAGGTAGGAAGATATTAGAAAGTTCATGGTTATTGCGTGGGAACAAGTTTAAGTTTAAGAAAGAGAGAAAAGTTTGTGCTGTTTGCCTAGAAGATTTTGAGGAAGACCAAGAGGTTATGAACCTTTCTTGCTCCCATAAGTACCATTCAGCATGTCTTCTCCCCTGGCTTGCATCTCATCCCCATTGTCCCTATTGTCGAACCTTAGTTCACTGTTGA | 504 | 0.4306 | MAGRLPGVGLPPRKRSEHHHNNRYEYHATHRDAYLRDKYSLESPWLDETALKARQRLQKKLAHFFSYSRSSESSNPIKEGKVSEIRRLEKKKESGLGRKILESSWLLRGNKFKFKKERKVCAVCLEDFEEDQEVMNLSCSHKYHSACLLPWLASHPHCPYCRTLVHC. | 168 |
Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Seca8g07514 | 167 | Gene3D | Zinc/RING finger domain, C3HC4 (zinc finger) | 104 | 166 | IPR013083 | - | |
Seca8g07514 | 167 | SUPERFAMILY | RING/U-box | 120 | 165 | - | - | |
Seca8g07514 | 167 | ProSiteProfiles | Zinc finger RING-type profile. | 121 | 162 | IPR001841 | - | |
Seca8g07514 | 167 | SMART | ring_2 | 121 | 161 | IPR001841 | - | |
Seca8g07514 | 167 | Pfam | Ring finger domain | 120 | 162 | IPR001841 | - | |
Seca8g07514 | 167 | CDD | RING-H2_PA-TM-RING | 120 | 162 | - | - | |
Seca8g07514 | 167 | PANTHER | RING FINGER AND PROTEASE ASSOCIATED DOMAIN-CONTAINING | 53 | 163 | - | - | |
Seca8g07514 | 167 | MobiDBLite | consensus disorder prediction | 1 | 24 | - | - |
Select | Gene | Chromosome | Start | End | Duplicated_type |
---|---|---|---|---|---|
Seca8g07514 | Seca-Chr8 | 172293432 | 172295968 | Dispersed/Wgd |
Select | Gene | Gene_start | Gene_end | Function | Ath_gene | Identity(%) | E-value | Score |
---|---|---|---|---|---|---|---|---|
Seca8g07514 | 115 | 165 | C3H Transcription Factor Family | AT3G58720 | 43.137 | 9.35e-12 | 59.7 |
Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Seca8g07514 | - | - | gmx:100527548 | 221.861 |
Select | Gene_1 | Chr_1 | Start_1 | End_1 | Gene_2 | Chr_2 | Start_2 | End_2 | Event_name |
---|---|---|---|---|---|---|---|---|---|
Seca8g07514 | 8 | 172293432 | 172295968 | Seca8g07514 | 8 | 172293432 | 172295968 | ECH |