Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Seca8g07511 ATGTCACTGAAAAGCATAGTTCGTGAACTCAAGGAGATCATAGATGGAATAGGTAGCATATCAAGGCGGGGTGGAGAAAGAAGGCATTGGCTCAGTAGGACAAAGTCACATGTTGCTCCGGATGTTGAAGAGAGTAAGACATCTTGGCCTGCAAGGGTTGTGGTTGTTTTTTGTGCTTCAGTATGTAAATCATGGAGGTCCATTACAAAAGAGATTGTCAAGACTCTTGAACAGTGTGGAAGGATTACATTTCCTATTTCATTGAAGCAGAAATGTGACAGAAATGAACTTAAACCTTTGGATACAAGGAAAGCCATTTTGTTTTGTTTTGATTTTTATTGTACAACGGAGAATGAGGGTAATAAGTTGTTATTAGCTGCCAAAAAGATAAGAAGGGCAACAGGAAAGAAAAGATGA 417 0.3885 MSLKSIVRELKEIIDGIGSISRRGGERRHWLSRTKSHVAPDVEESKTSWPARVVVVFCASVCKSWRSITKEIVKTLEQCGRITFPISLKQKCDRNELKPLDTRKAILFCFDFYCTTENEGNKLLLAAKKIRRATGKKR. 139
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Seca8g07511 138 PANTHER TUBBY-RELATED 37 134 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Seca8g07511 Seca-Chr8 172247926 172248683 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Seca8g07511 1 134 TUB Transcription Factor Family AT2G18280 44.048 1.57e-34 122
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Seca8g07511 K19600 - gmx:100777506 159.844